Sphaerobacter thermophilus: Sthe_1301
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Entry
Sthe_1301 CDS
T01128
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sti
Sphaerobacter thermophilus
Pathway
sti03030
DNA replication
sti03430
Mismatch repair
sti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sthe_1301
03430 Mismatch repair
Sthe_1301
03440 Homologous recombination
Sthe_1301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sti03032
]
Sthe_1301
03400 DNA repair and recombination proteins [BR:
sti03400
]
Sthe_1301
Enzymes [BR:
sti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sthe_1301
DNA replication proteins [BR:
sti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sthe_1301
DNA repair and recombination proteins [BR:
sti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sthe_1301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACZ38736
UniProt:
D1C3B9
LinkDB
All DBs
Position
1:complement(1440053..1443556)
Genome browser
AA seq
1167 aa
AA seq
DB search
MTARPFAHLHLHTEFSLLDGMGRIKDYMARAREFGMEHIAITDHGVMYGVIDWYKAARAH
DLHPILGIEAYLAPGSIEDREKQSYHLLLLAENERGYRNLLRLASRASLEGFYYKPRVDL
DMLNSLRDGIICTSACLGGPVANNFLQGRDEEAVRLAGILKEMFGPDHFYIEIQDHGIEG
QRQTNPQLIELARKLDLPLVATNDVHYVDKSDAPLQELLVCIQTNTTLHDPKRLRMESDQ
LYFKSPEEMWRLFGEVPEALENTIRIAERCNVDLEFGRLHLPDPGIPEGMTPHEYLCQLC
WDGVRRRYPEVTEEVRRRLEYELDVIQETGFSSYMLIVRDFAEFARQRRISFGVRGSAAA
SIVLYTLGITDIDPLANRLVFERFLNRERREMPDIDMDFADNRRAEVIDYVASKYGHDRV
AQIITFGTMGAKAAIRDTGRAMGWAYNDVDRIARLIPSTLNITLDKALQESPELRQLYET
DPACRELIDNAKRLEGISRHAGTHAAGVVIAADPLVEHLPLQRPARAEEGALPTTQFPME
TVAEIGLLKMDFLGLANLTILGEAVELIRQTTGVEIDPKKIPDGDEKTYAMLSQGETFGV
FQLESAGMRRYIRELRPSSIAELAAMVALYRPGPMQHIPTYCRAKHGLEPIRYPHPDLAE
ILDETYGVIVYQDQVLLIARKFAGYTLGEADIMRKAMGKKIPEVMKAERERFLRGAQEKG
YSAEDAQNVFNLIEPFAGYAFNKAHAVCYATISYQTSYLKANYPAEYMTAVLRGAPSHPS
GATQRVAAAVAECQKLGIPVLPPDINKSGVDFEIEILEDGTKAIRFGLAIVKNVGEAAVE
SIVAARKSLPGERFESFEQFCDTVDWTVVNRRVAESLIKCGALDSLGDRATLLAVLEQAI
SAAQSRQRAAKRGQIDLFSAAPVAAPALALAMPDDVPEIPRATLLAWEKELLGLYLSSHP
LNDLVPLIRDGGYVRLAEIDEETVGQQIEAIVMITGMRKLTTKTNRVMAICQLEDQTGAI
EMVVFPDLYEQAGEHLVVDSIVRVAARVDQRNDRIQLVADRVGPVTIEEPKPVVVREVHV
RLPDTGNVTADVETMNRVRELFDQFPGDDGVILHVPARGRTVLMRASLSIDWCPDVERAL
EEMLGPGCATVSERTVMVPAEPRRLTA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcgtccgttcgcgcatttgcacctgcacaccgagttctcgctcctcgatggc
atggggcgcatcaaggactacatggcccgcgcacgtgagttcgggatggagcacatcgcc
atcaccgaccacggcgtgatgtacggcgtgatcgactggtacaaggcggcgcgcgcacac
gacctccacccgatcctggggattgaggcctacctcgcaccgggcagcatcgaggaccgg
gaaaagcagtcgtaccacctgctcttgctcgcggagaacgagcggggctaccggaacctg
ttgcggttggccagccgggcgagcctggagggcttctactataagccgcgcgtcgacctg
gacatgctcaacagtctccgcgacggcatcatctgcacttcggcctgtctcggtgggccg
gtcgccaacaactttctgcaggggcgcgacgaggaagccgtgcgtctggccggcatcctg
aaggagatgttcggcccggatcacttctatattgaaatccaggaccacggaatcgaaggc
cagcggcagaccaacccgcaactgatcgagctcgcgcggaagctcgacctgccgctggtg
gcaacgaacgacgtccactacgtcgacaagtccgacgcgccgctgcaagagctgctggtc
tgtatccagaccaacacgacgctccacgaccccaagcgcctccggatggagagtgaccag
ctctacttcaagagcccggaggagatgtggcggctcttcggtgaggtgcccgaggcgctg
gagaacacgatccgcatcgcggagcgctgcaacgtcgacctcgagttcggccggttgcac
ctgcctgaccccggcattcccgagggtatgaccccgcacgagtacctgtgccagctttgc
tgggacggtgtgcgccgccgctaccccgaagtgaccgaggaggtgcgccgccgcctggag
tacgagctggacgtcatccaggagacgggcttcagcagctacatgctgatcgtgcgcgac
ttcgcggagttcgcgcggcagcgtcgcatttccttcggcgtacgcggcagtgcggcagcc
agtatcgtcctctataccctgggcatcaccgacatcgacccgctggcgaaccggctggtg
ttcgagcgcttcctgaaccgggagcgccgcgagatgccggatatcgacatggacttcgcc
gacaaccgacgcgcggaggtcatcgactacgtcgccagcaaatacggccacgaccgggtg
gcccagatcatcacctttggaacgatgggcgcgaaggcggcgatccgtgacaccggccgg
gccatgggctgggcgtacaacgatgtcgaccggatcgcgcggctgatcccgtcgacgctc
aatatcacgcttgacaaggccctgcaggagagcccggagctgcgccagctctacgagacg
gatccggcgtgccgcgagctgatcgacaacgccaagcgactcgagggtatctcccgccat
gccggtacgcatgcggcgggtgtagtgatcgcagccgacccgctggtcgagcatctacct
ctgcagcgcccggcacgtgccgaggagggggctcttccgaccacccagttcccgatggag
acggtggccgagatcggcctgctgaagatggacttcctcgggctggccaacctcaccatc
ctcggcgaggcggtcgagctgatccgccagacgacgggtgttgagatcgaccccaagaaa
atcccggacggcgacgagaagacctatgccatgctgtcgcagggcgagaccttcggcgtg
ttccagctcgagagcgccggcatgcgtcgctacatccgggagctgcggcccagctccatc
gccgagctggcggccatggtggccctctaccggccggggccgatgcagcacatccccacc
tactgccgcgccaagcatggactggagccgatccgctatccgcacccggacctggcggag
atcctggacgagacgtacggcgtcatcgtctatcaggaccaggtgcttctgatcgctcgc
aagttcgccgggtacaccctgggcgaggccgacatcatgcgcaaggcgatggggaagaag
atccccgaggtgatgaaggccgagcgcgagcgcttcctgcgtggcgcacaggagaagggg
tacagcgcggaggacgcgcagaacgtcttcaacctgattgagccgttcgcgggctatgcc
ttcaacaaggcgcacgcagtctgctacgcgacgatctcctatcagacctcgtacctgaag
gccaactacccggccgagtacatgacggccgtgctgcggggtgcgcccagccacccgagc
ggcgcgacgcagcgcgtggcggcggcggtggcggagtgccagaagctcggcatcccggtg
ctcccgcccgatatcaacaagagcggcgtcgattttgagatcgagatccttgaggatggg
actaaggcaatccgcttcggcctggcgatcgtgaagaacgtcggcgaggctgccgtggag
tccattgtcgcggcgcgcaagtcgctgccgggcgagcgcttcgagagcttcgagcagttc
tgcgacacggttgactggacggtggtcaaccgtcgggtggctgagagcctgatcaagtgt
ggtgcgctggacagcctcggtgaccgcgctaccttgctggcggtcctggagcaggcgatc
agcgccgcgcaatcgcggcagcgtgcggccaagcgcggacagatcgacctcttctccgca
gcgcctgtggccgcccccgccctggcactggcgatgccggacgacgtgccggagatcccg
cgcgccacgctcctcgcctgggagaaggaactgctggggctctacctcagctcgcacccc
ctgaacgatctcgttccgctgatccgggacggtgggtacgtgcggctggccgagatcgac
gaggagaccgtcggccagcagatcgaagcgatcgtgatgatcacgggcatgcgcaagctg
accaccaagacgaaccgggtgatggcgatctgccagctcgaagatcagaccggggcgatc
gagatggtggtcttcccggacctctacgaacaggcgggcgagcacctcgtcgtcgactcc
atcgtgcgggtcgctgcacgggtggatcaacgcaacgaccgcatccagctcgtcgccgac
cgcgtgggaccagtgaccatcgaagagccgaagccggtggtggtccgcgaggtgcatgtc
cgtctcccggacacgggcaatgtcaccgccgacgtcgagaccatgaaccgggtgcgcgaa
ctgttcgaccagttcccgggcgacgacggcgtgatcttgcacgtccctgcgcgcggccga
accgtgctgatgcgggcatccctgagtattgactggtgccccgatgtcgagcgggcgctg
gaggagatgctcggccctggctgcgcgacagtctccgagcgcactgtgatggttcccgcc
gagccgcggcgcctcaccgcgtag
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