Sphaerobacter thermophilus: Sthe_3006
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Entry
Sthe_3006 CDS
T01128
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sti
Sphaerobacter thermophilus
Pathway
sti00061
Fatty acid biosynthesis
sti00071
Fatty acid degradation
sti01100
Metabolic pathways
sti01212
Fatty acid metabolism
sti02024
Quorum sensing
sti04146
Peroxisome
Module
sti_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sti00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sthe_3006
00071 Fatty acid degradation
Sthe_3006
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sthe_3006
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sthe_3006
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sti01004
]
Sthe_3006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sti04147
]
Sthe_3006
Enzymes [BR:
sti01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sthe_3006
Lipid biosynthesis proteins [BR:
sti01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sthe_3006
Exosome [BR:
sti04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sthe_3006
Exosomal proteins of breast cancer cells
Sthe_3006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACZ40409
UniProt:
D1C9B6
LinkDB
All DBs
Position
2:649250..650884
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AA seq
544 aa
AA seq
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MSERPWLAHYPPGVPATLEYPEVTLDQFIEQSVAKHADLTALRFATISMTYRELWGRVLR
CAAALAELGIGKGDRVALMLPNCPQYVIAYFGTLRAGGIVVQVSPLSTPRELVHHLSTSG
AETIVVADMLYPMVQAVLPQVNLRNVLVTRLRGEVTPGPEARAFEEVLMSTTGAPPDVQV
TPDDVAVLQYTGGTTGIAKGAMLTHRNLVVNVLQSAAPNPDFPSGADLRVLTVLPLFHVY
GMTVCMNLGLARGGELILLPRFEPAEVLETIKATQPTSFPGVPTMYVAINSVPNAEEYGV
GSIRFCNSGGAPMPLEVMEAFEQRFGATIIEGYGLSETSPVTHVNPATGLRKPGTIGIPV
PDTDAEIVDIDTGTRVLPPGEPGELRIRGPQVMAGYWGMPEETADAMRDGWFYTGDIATM
DEDGYFTIVDRKKDMILASGLNVYPREVEEVLYEHPAVLEAGVIGVPDPYRGESVKAYVV
LKPGASATAEELEAYCREHLSAYKVPHAFEFRDTLPKSGVGKVLRRVLVEEERQRTPEET
ATSE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacgtccctggctagcgcactatccgcccggcgtcccggcgacgctggagtat
cccgaggtcacgctggaccagttcatcgagcagtcggtggccaagcacgccgatctgacc
gcgctgcgcttcgccacgatctcgatgacctaccgtgagctgtggggccgggtgctgcgc
tgcgccgcggccctggcggagctgggcatcggcaagggggatcgcgtcgcgctcatgctg
ccgaactgcccccagtacgtcatcgcctacttcggcacgctgcgggcaggcgggatcgtc
gtgcaggtcagcccgctcagcaccccgcgcgagctggtgcaccacctcagcacgtcgggc
gcggagacgatcgtcgtagccgatatgctctacccgatggtgcaggcggtgctgccccag
gtgaacctcaggaacgtgctggtgacccggctgcggggtgaggtgaccccggggccggag
gcccgcgccttcgaggaagtgctgatgtccacgaccggcgcgccgccggatgtgcaggta
acgcccgatgacgtcgcggtgctccagtacaccggcggcaccaccggcatcgccaagggc
gccatgctgacacaccgcaatctggtagtgaacgtactgcagtcggccgcccccaaccct
gactttcccagcggcgccgacctgcgggtgctgacggtcctgccactcttccacgtctac
ggcatgacggtctgcatgaacctggggctggcccgcggcggggagttgatcctgctcccg
cgcttcgaaccggccgaggtgctggaaacgatcaaggcgacccagccgacctcgttcccc
ggcgtcccgacgatgtacgtcgcgatcaacagcgtccccaacgccgaggagtacggcgtc
ggctcgatccgcttctgcaactcgggtggggcgccgatgccgctcgaggtgatggaggcc
ttcgagcagcgcttcggcgccacgattatcgagggctacgggctgtccgaaacctccccg
gtcacgcacgtcaacccggcgaccgggctgcgcaagccggggacgatcggcatcccggtg
ccggacaccgacgccgagatcgtcgatatcgacaccggcacccgcgtcctcccgcccggc
gagccgggcgagctgcgcatccgcgggccgcaggtgatggcgggctactggggcatgccg
gaggaaacggcggacgccatgcgcgacggctggttctacaccggcgacatcgccaccatg
gacgaggacggctacttcaccatcgtcgaccgcaagaaggacatgattctggcgagcggc
ttgaacgtctacccgcgcgaggtcgaggaggtcctctacgagcacccggcggtgctggag
gccggcgtcatcggcgtgcccgacccctaccggggcgagtcggtgaaggcctacgtagtc
ctgaagccgggggcgagcgcgacggcggaggagctggaagcgtactgccgcgagcatctc
tccgcctacaaggtgccgcatgcgttcgagttccgcgacacgctgcccaagagcggggtc
ggcaaggtgctgcgccgcgtgctggttgaggaggagcgccagcgcacgccggaggagacc
gccacaagcgagtag
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