Streptomyces sp. ICC4: DRB89_09320
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Entry
DRB89_09320 CDS
T10587
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stic Streptomyces sp. ICC4
Pathway
stic03420
Nucleotide excision repair
stic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DRB89_09320 (pcrA)
03430 Mismatch repair
DRB89_09320 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stic03400
]
DRB89_09320 (pcrA)
Enzymes [BR:
stic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DRB89_09320 (pcrA)
DNA repair and recombination proteins [BR:
stic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DRB89_09320 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DRB89_09320 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AWZ04816
LinkDB
All DBs
Position
2025654..2028200
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AA seq
848 aa
AA seq
DB search
MSSLFDDSFLADLSPSDEVPPPPEDHAAPEPGADDLFGGRFDMADGSGGRGDAYYRDGAP
RPVIDPAALLDGLNTEQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIGHLLGARGVHPGQI
LAITFTNKAAGEMKERVEGLVGPRANAMWVSTFHSACVRILRRESKRLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKKFPPKAFSAKISNLKNELIDEDAFAGQAVDGFEKTLAQAYAM
YQGRLREANALDFDDIIMTTVHLLQAFPEVAEHYRRRFRHVLVDEYQDTNHAQYTLVREL
VGTGYPDLAPAELCVVGDADQSIYAFRGATIRNILQFEEDYADATTILLEQNYRSTQTIL
SAANAVIERNENRRAKNLWTDAGSGSVITGYVADTEHDEAQFIADEIDRLTDAGDAKAGD
VAIFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLSNPEDNVPLRR
ILNVPKRGIGERAEAMIDALGMREKITFPQALRRVDEAFGMAARSTNAVKRFNVLMEELR
TIVDSGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQAREAAAA
EAAENGTPPVGPGTLSEFLEQVALVADSDQIPDEDTDGNGVITLMTLHTAKGLEFPVVFL
TGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSMRSAWGTPSYNPPSRF
LEEIPAEYLQWKRTGAAQKPAGPMRSSGYGASGSGGAGGGSKTSFGTSPESFLSSSRAKS
GPSGFATRRASDKPVIALVVGDRVTHDQFGLGTVMEVRGAGADAQATIDFGDEKPKRLLL
RYAPVQKL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggccgacctctccccctccgacgaggtcccg
ccgccgcccgaggatcacgccgcccccgagccgggcgcggacgatctcttcgggggccgg
ttcgacatggccgacggcagtggggggcgcggggacgcgtactaccgggacggggccccc
cggcccgtcatcgacccggccgcgctcctggacgggctgaacacggagcagcgcgcggcc
gtcgtgcacgcgggatcaccgctgctcatcgtggccggcgccggatccggcaagacccgc
gtgctgacgcaccgcatcgggcacctgctgggcgcgcgcggggtccaccccggccagatc
ctggcgatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgagggcctg
gtcggcccgcgcgcgaacgccatgtgggtctccaccttccacagcgcgtgcgtccgcatc
ctgcgccgcgagtccaagcggctcggtttcacctcgtcgttctcgatctacgacgcggcc
gactcgaagcgcctgatggcgctcgtctgccgcgacctggacctggacccgaagaagttc
ccgccgaaggccttcagcgccaagatctcgaacctgaagaacgagctcatcgacgaggac
gccttcgccggacaggccgtggacggcttcgagaagaccctcgcccaggcgtacgcgatg
taccaggggcggctgcgcgaggccaacgcgctcgacttcgacgacatcatcatgaccacg
gtccacctgctccaggccttcccggaggtcgccgagcactaccggcgccgcttccggcac
gtgttggtcgacgagtaccaggacaccaaccacgcccagtacacgctcgtgcgcgagctg
gtcggcacgggctatccggacctggcgcccgccgagctgtgcgtcgtgggcgacgccgac
cagtcgatctacgccttccgcggcgcgaccatccgcaacatcctccagttcgaagaggac
tacgcggacgccaccacgatcctgctggagcagaactaccgctccacgcagacgatcctg
tccgccgccaacgcggtcatcgagcgcaacgagaaccgccgcgcgaagaacctgtggacc
gacgccggcagcggctccgtgatcaccggctacgtcgcggacaccgagcacgacgaggcg
cagttcatcgccgacgagatcgaccggctgacggacgcgggcgacgccaaggccggcgac
gtcgcgatcttctaccggaccaacgcgcagtcccgcgtgttcgaggagatcttcatccgc
gtcggactgccctacaaggtcgtcggcggcgtccggttctacgagcgcaaggaggtccgc
gacgtcctcgcgtacctgcgcgtcctgtcgaatcccgaggacaacgttccgctgaggcga
attctcaacgtgcccaagcgcggcatcggcgagcgcgccgaggcgatgatcgacgcgctg
ggcatgcgcgagaagatcaccttcccgcaggcgctgcgccgggtcgacgaggccttcggc
atggccgcccgctcgaccaacgccgtcaagcgcttcaacgtgctgatggaggagctccgc
acgatcgtcgattcgggcgcgggcccggcggtggtgctggaggcggtcctggagcgtacg
ggctacctcgccgagctccaggcgtcgaccgacccgcaggacgagacgcggatcgagaac
ctgcaggagctggccgccgtggcgctcgagttcgagcaggcgcgggaggcggcggcggcc
gaggccgccgagaatggcaccccgccggtgggccccggcaccctctcggagttcctggag
caggtcgcgctcgtcgccgactccgaccagatcccggacgaggacaccgacggcaacggg
gtcatcaccctgatgaccctgcacaccgccaagggcctcgagttcccggtggtcttcctg
accggcatggaggacggggtcttcccgcacatgcgcgcgctgggccagaccaaggagctc
gaggaggagcgccgcctggcctacgtcggcatcacgcgggcgcgcgagcggctgtacctg
acgcgctcctcgatgcgcagcgcgtggggcaccccctcgtacaacccgccgtcgcggttc
ctcgaggagatcccggccgagtacctgcagtggaagcggacgggcgcggcgcagaagccg
gcgggcccgatgcgcagctcggggtacggggcatcaggctcgggtggggccgggggcggg
tccaagacctcgttcgggacctcgccggagtcgttcctgtcctcgtcccgtgcgaagtcg
ggtccgtccgggttcgcgacgcggcgggcgagcgacaagccggtcatcgcgctggtggtc
ggggaccgggtcacgcacgaccagttcgggctgggcacggtcatggaggtcaggggagcg
ggcgcggacgcgcaggccaccatcgacttcggggacgagaagccgaagcggctgctgctg
cggtacgcgccggtgcagaagctctga
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