Streptomyces sp. ICC4: DRB89_13405
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Entry
DRB89_13405 CDS
T10587
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
stic Streptomyces sp. ICC4
Pathway
stic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DRB89_13405 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stic03019
]
DRB89_13405 (groL)
03110 Chaperones and folding catalysts [BR:
stic03110
]
DRB89_13405 (groL)
03029 Mitochondrial biogenesis [BR:
stic03029
]
DRB89_13405 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stic04147
]
DRB89_13405 (groL)
Enzymes [BR:
stic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DRB89_13405 (groL)
Messenger RNA biogenesis [BR:
stic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DRB89_13405 (groL)
Chaperones and folding catalysts [BR:
stic03110
]
Heat shock proteins
HSP60 / Chaperonin
DRB89_13405 (groL)
Mitochondrial biogenesis [BR:
stic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DRB89_13405 (groL)
Exosome [BR:
stic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DRB89_13405 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DRB89_13405 (groL)
Exosomal proteins of breast cancer cells
DRB89_13405 (groL)
Exosomal proteins of colorectal cancer cells
DRB89_13405 (groL)
Exosomal proteins of bladder cancer cells
DRB89_13405 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AWZ05491
LinkDB
All DBs
Position
2877061..2878689
Genome browser
AA seq
542 aa
AA seq
DB search
MPKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSEELLATARPIEDKSDIAAVAALSAQDQQVGDLIAEAMDKVGKDGVITVEESNA
FGLELEFTEGMAFDKGYLSPYMVSDQERMEAILDDPYILINQGKISSIQDLLPLLEKVIQ
AGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGATV
IAEEVGLKLDQAGLDVLGSARRVTISKDSTTIVDGGGSSAEVLGRVNQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLGLSGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITAKVAELEKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPADDEGDAGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagattctcaagtttgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtgatcgac
aagaagttcggtgcgcccaccatcacgaacgacggtgtcaccatcgctcgcgaggtcgag
ctggacgacccgtacgagaaccttggcgcgcagctcgtcaaggaggtcgcgaccaagacc
aacgacgtcgcgggtgacggcaccaccaccgccaccgtcctggcccaggcactggtccgc
gagggtctgcgcaacgtcgccgcgggtgcttccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtgtccgaggagctcctcgcgaccgcccgcccgatcgaggacaag
tccgacatcgccgccgtggccgcgctctccgcgcaggaccagcaggtcggcgacctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacgcc
ttcggcctggagctcgagttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtctccgaccaggagcgtatggaggccatcctcgatgacccgtacatcctgatc
aaccagggcaagatctcctccatccaggacctcctgccgctgctcgagaaggtcatccag
gccggcgcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggcgctctcc
accctcgtcgtcaacaagatccgtggcaccttcaacgccgtcgccgtcaaggcgcccggc
ttcggtgaccgccgcaaggcgatgctgcaggacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtactgggctccgcc
cgccgcgtcacgatctccaaggacagcaccaccatcgtcgacggtggcggcagctcggcc
gaggtcctcggccgcgtcaaccagatcaaggccgagatcgagtcgaccgactcggactgg
gaccgcgagaagctgcaggagcgcctggcgaagctcgccggcggcgtctgcgtcatcaag
gtcggcgccgccaccgaggtggagctcaaggagaagaagcaccgtctcgaggacgccatc
tcggcgacccgcgccgcggtcgaggagggcatcgtctccggcggtggctccgctctcgtc
cacgccgtgaaggtgctcgaaggcaacctcggcctgtcgggcgacgaggccaccggtgtc
gcggtcgtgcgccgcgccgccgtcgagccgctgcgctggatcgcggagaacgccggcctc
gagggctacgtcatcaccgcgaaggtcgccgagctcgagaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgcgctggagaacgccgcttccatcgcgtccctgctgctcacgaccgagaccctg
gtcgtcgagaagccggccgacgacgagggcgacgccggtcacggccacggccacggccac
agccactga
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