Streptomyces sp. ICC4: DRB89_24120
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Entry
DRB89_24120 CDS
T10587
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stic Streptomyces sp. ICC4
Pathway
stic00300
Lysine biosynthesis
stic00470
D-Amino acid metabolism
stic01100
Metabolic pathways
stic01110
Biosynthesis of secondary metabolites
stic01120
Microbial metabolism in diverse environments
stic01230
Biosynthesis of amino acids
Module
stic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DRB89_24120 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DRB89_24120 (lysA)
Enzymes [BR:
stic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DRB89_24120 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AWZ07190
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Position
complement(5167052..5168413)
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AA seq
453 aa
AA seq
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MSVTFPSSPVRTSDPIPAPDAAEGLSVWPASARPAAGGDVTVAGISLTEAADRFGTPLYV
LDEGEVRDRCRAYRTAFPDADVIYAAKAFLCRAMARWVEDEGLGLDVCSAGELGLAMTAG
FPAERIVLHGNAKSPEDLYTAVRLGVGRIVLDSTSEIARLADIVPEGERQQVMIRVVPGI
AAGGHTKIRTGTEDQKFGLSITDGSAQHAIARVLAQPRLELVGLHCHIGSQITSVKPYVA
AVRRMVGLMTQIRDHHDLEPPQLNIGGGHGIAYRPGEDSLDLTTLANRVLAELADGCAHA
KLPVPRLTIEPGRALVGPAGVAVYRVLTVKETSGRTFVAVDGGMSDNPRPALYGVRYAPR
LIGRASTALPALVTVVGRHCEAGDVVAEDVALPGDVRPGDLIAVPAAGAYHLSMASGYNL
VGRPPVIAVRDGSARMLVRRESMDDMNRRDIGL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcactttcccttcctccccggtccggacctcggatccgataccggcccccgac
gccgccgaggggctctccgtctggcccgcctcggcccgcccggccgccggaggcgacgtc
accgtcgccgggatctccctcaccgaagcggccgatcggttcggcacccccctgtacgtc
ctggacgagggcgaggtccgcgaccgctgccgcgcctaccgcacggccttcccggacgcg
gacgtcatctacgcggccaaggcgttcctctgccgggccatggcccgctgggtcgaggac
gagggcctgggcctggacgtctgctccgccggcgagctgggcctcgccatgaccgcgggc
ttccccgccgagcggatcgtgctgcacggcaacgccaagagccccgaggacctgtacacc
gccgtccggctcggcgtcggccgcatcgtcctcgacagcacctcggagatcgcccgactg
gccgacatcgtgcccgaaggcgaacgccagcaggtcatgatccgggtcgtgcccggcatc
gcggccggcggtcacaccaagatccgcaccggtacggaggaccagaagttcggcctctcg
atcacggacggctccgcccagcacgccatcgccagggtcctcgcccagccccgtctcgaa
ctcgtgggactgcactgccacatcggctcccagatcacctcggtcaagccgtacgtcgcc
gccgtacgccggatggtcggcctgatgacccaaatacgggaccaccacgacctggaaccg
ccccagttgaacatcggcggcggccacggcatcgcctaccgccccggcgaggacagcctc
gacctcaccaccctcgccaaccgggtcctggccgagctggcggacggctgcgcccacgcg
aagctgcccgtaccgcgcctgaccatcgagcccgggcgggcgctcgtaggccccgccgga
gtcgccgtctaccgggtcctcacggtcaaggagacctcggggcggacgttcgtcgccgtc
gacggcggcatgagcgacaacccccggccggccctgtacggggtccggtacgcgccccgg
ctgatcggccgcgcctcgacggccctgcccgccctggtcacggtggtgggccggcactgc
gaggccggcgacgtcgtggcggaggatgtcgcgctgcccggcgacgtgcgacccggagac
ctcatcgcggtaccggccgccggcgcgtaccacctgtccatggcctccggctacaacctg
gtcggccgcccgcccgtgatcgcggtccgggacggctccgcgcggatgctcgtacgccgt
gaatccatggacgacatgaaccgccgggacatcggcctgtag
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