Streptomyces sp. ICC4: DRB89_24540
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Entry
DRB89_24540 CDS
T10587
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
stic Streptomyces sp. ICC4
Pathway
stic02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DRB89_24540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stic03021
]
DRB89_24540
Transcription machinery [BR:
stic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DRB89_24540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Pox_Ag35
Sigma70_r1_1
CDC27
HC2
Motif
Other DBs
NCBI-ProteinID:
AWZ07257
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Position
5260829..5262436
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AA seq
535 aa
AA seq
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MPLSVRNERLLVSLSPSRTFPTEIAESEALVALVERGREQGHINGDDVRQAFEAGRIPVD
QWKRVLRSLNQVLDEEGVALHVSAAPATKVAAKKPRKAAAAPARAVTKKAAAPPRLIGAR
KTAAPATAAAISDPSASGTEEEVAAEAAAAPKKRTVKKTAVKKTAVKKTAATKKTAKDGD
EGDAPVALGEDWAAEDLDEGDEKETPKTGGSAGFVLSDDDEDDAPAQTVMVAGATADPVK
DYLKLIGKVPLLNAEQEVELAKRIEAGLFSEYKLEEEEDHKPAFKRELEILVEDGRRAKN
HLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNVGLIRAVEKFDYTKGFKFSTYATWWIRQ
AITRAMADQSRTIRIPVHMVEIINKLARVQRQMLQDLGREPTPEELGKELDMTPEKVIEV
QKYGREPISLHTPLGEEGDSEFGDLIEDSEAVVPADAVSFTFLQEQLQSILGTLSEREAG
VVSMRYGLNDGQPKTLDEIGRVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atccctttatctgttcgcaacgagaggctccttgtgtcgctcagcccgtcccgtacgttc
cccacggagatcgccgaatccgaggccctggtcgcgcttgtcgagcgcggccgcgagcag
ggtcacatcaacggtgatgacgtgcgccaggccttcgaggccggccgcatcccggtggac
cagtggaagcgggtcctgcgcagcctgaaccaggtcctggacgaggagggcgtcgcgctg
cacgtcagcgccgcgcccgccacgaaggttgccgccaagaagccgcgcaaggcggccgcc
gccccggcgcgtgccgtcaccaagaaggccgccgccccgccgcgcctcatcggcgcgcgc
aagacggcggcccccgccaccgccgcggcgatatccgacccgtcggcctccggcaccgag
gaggaggtggcggccgaggccgctgccgcgccgaagaagcggacggtcaagaagaccgcc
gtgaagaagaccgcggtcaagaagacggccgccacgaagaagaccgccaaggacggcgac
gagggcgacgcccccgtggccctgggcgaggactgggcagccgaggacctcgacgagggc
gacgagaaggagacgcccaagacgggcggcagcgccggcttcgtcctgtccgacgacgac
gaggacgacgctccggcgcagacggtcatggtcgccggcgccaccgccgaccccgtcaag
gactacctcaagctcatcggcaaggtgccgctgctcaacgccgagcaggaggtcgagctc
gccaagcggatcgaggccggtctcttctccgagtacaagctcgaagaggaggaggaccac
aagcccgccttcaagcgcgagctcgagatcctggtcgaggacggccgccgcgccaagaac
cacctgctggaggccaacctccgcctcgtggtctcgctggccaagcgctacaccggccgc
ggcatgctcttcctggacctgatccaggagggcaacgtcggcctgatccgcgccgtggag
aagttcgactacaccaagggcttcaagttctccacgtacgcgacctggtggatccggcag
gcgatcacgcgcgccatggccgaccagtcgcgcaccatccgcatccccgtccacatggtc
gagatcatcaacaagctggcccgcgtccagcgccagatgctccaggacctcggccgggag
cccactccggaggagctgggcaaggaactcgacatgacccccgagaaggtcatcgaggtc
cagaagtacggccgcgagccgatctccctgcacaccccgctgggtgaggagggcgacagc
gagttcggtgacctcatcgaggactccgaggcggtcgtcccggccgacgccgtgagcttc
accttccttcaggagcagctccagtcgatcctgggcacgctctcggagcgcgaggcgggc
gtggtctccatgcgctacggcctcaacgacggccagccgaagaccctcgacgagatcggc
cgcgtgtacggggtcacccgtgagcgcatccgccagatcgagtcgaagaccatgtcgaag
ctccgtcacccgtcgcgctcgcaggtgctgcgcgactacctcgactaa
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