KEGG   Streptomyces sp. ICC4: DRB89_24540
Entry
DRB89_24540       CDS       T10587                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
stic  Streptomyces sp. ICC4
Pathway
stic02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:stic00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DRB89_24540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stic03021]
    DRB89_24540
Transcription machinery [BR:stic03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DRB89_24540
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Pox_Ag35 Sigma70_r1_1 CDC27 HC2
Other DBs
NCBI-ProteinID: AWZ07257
LinkDB
Position
5260829..5262436
AA seq 535 aa
MPLSVRNERLLVSLSPSRTFPTEIAESEALVALVERGREQGHINGDDVRQAFEAGRIPVD
QWKRVLRSLNQVLDEEGVALHVSAAPATKVAAKKPRKAAAAPARAVTKKAAAPPRLIGAR
KTAAPATAAAISDPSASGTEEEVAAEAAAAPKKRTVKKTAVKKTAVKKTAATKKTAKDGD
EGDAPVALGEDWAAEDLDEGDEKETPKTGGSAGFVLSDDDEDDAPAQTVMVAGATADPVK
DYLKLIGKVPLLNAEQEVELAKRIEAGLFSEYKLEEEEDHKPAFKRELEILVEDGRRAKN
HLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNVGLIRAVEKFDYTKGFKFSTYATWWIRQ
AITRAMADQSRTIRIPVHMVEIINKLARVQRQMLQDLGREPTPEELGKELDMTPEKVIEV
QKYGREPISLHTPLGEEGDSEFGDLIEDSEAVVPADAVSFTFLQEQLQSILGTLSEREAG
VVSMRYGLNDGQPKTLDEIGRVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1608 nt   +upstreamnt  +downstreamnt
atccctttatctgttcgcaacgagaggctccttgtgtcgctcagcccgtcccgtacgttc
cccacggagatcgccgaatccgaggccctggtcgcgcttgtcgagcgcggccgcgagcag
ggtcacatcaacggtgatgacgtgcgccaggccttcgaggccggccgcatcccggtggac
cagtggaagcgggtcctgcgcagcctgaaccaggtcctggacgaggagggcgtcgcgctg
cacgtcagcgccgcgcccgccacgaaggttgccgccaagaagccgcgcaaggcggccgcc
gccccggcgcgtgccgtcaccaagaaggccgccgccccgccgcgcctcatcggcgcgcgc
aagacggcggcccccgccaccgccgcggcgatatccgacccgtcggcctccggcaccgag
gaggaggtggcggccgaggccgctgccgcgccgaagaagcggacggtcaagaagaccgcc
gtgaagaagaccgcggtcaagaagacggccgccacgaagaagaccgccaaggacggcgac
gagggcgacgcccccgtggccctgggcgaggactgggcagccgaggacctcgacgagggc
gacgagaaggagacgcccaagacgggcggcagcgccggcttcgtcctgtccgacgacgac
gaggacgacgctccggcgcagacggtcatggtcgccggcgccaccgccgaccccgtcaag
gactacctcaagctcatcggcaaggtgccgctgctcaacgccgagcaggaggtcgagctc
gccaagcggatcgaggccggtctcttctccgagtacaagctcgaagaggaggaggaccac
aagcccgccttcaagcgcgagctcgagatcctggtcgaggacggccgccgcgccaagaac
cacctgctggaggccaacctccgcctcgtggtctcgctggccaagcgctacaccggccgc
ggcatgctcttcctggacctgatccaggagggcaacgtcggcctgatccgcgccgtggag
aagttcgactacaccaagggcttcaagttctccacgtacgcgacctggtggatccggcag
gcgatcacgcgcgccatggccgaccagtcgcgcaccatccgcatccccgtccacatggtc
gagatcatcaacaagctggcccgcgtccagcgccagatgctccaggacctcggccgggag
cccactccggaggagctgggcaaggaactcgacatgacccccgagaaggtcatcgaggtc
cagaagtacggccgcgagccgatctccctgcacaccccgctgggtgaggagggcgacagc
gagttcggtgacctcatcgaggactccgaggcggtcgtcccggccgacgccgtgagcttc
accttccttcaggagcagctccagtcgatcctgggcacgctctcggagcgcgaggcgggc
gtggtctccatgcgctacggcctcaacgacggccagccgaagaccctcgacgagatcggc
cgcgtgtacggggtcacccgtgagcgcatccgccagatcgagtcgaagaccatgtcgaag
ctccgtcacccgtcgcgctcgcaggtgctgcgcgactacctcgactaa

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