Streptomyces sp. ICC4: DRB89_26320
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Entry
DRB89_26320 CDS
T10587
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
stic Streptomyces sp. ICC4
Pathway
stic02020
Two-component system
stic02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DRB89_26320
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DRB89_26320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stic03021
]
DRB89_26320
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
stic02035
]
DRB89_26320
Transcription machinery [BR:
stic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DRB89_26320
Bacterial motility proteins [BR:
stic02035
]
Flagellar system
Flagellar assembly proteins
Stator
DRB89_26320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
HTH_Tnp_ISL3
UPF0122
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AWZ07541
LinkDB
All DBs
Position
complement(5648462..5649298)
Genome browser
AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAVPPAARSSERSTAPSSLEVLWRSYKDSGDERLREQLILHYSPLVKYVA
GRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIERSIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARAVERAYATLEAQLRRTPTEVEVAREMGIAVEELHAVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPEREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctcagggtctgaccgcgctgcggtgccccccgctgcgcgcagcagc
gagcggtccaccgcgccctcgtccctggaggtgctgtggcgctcgtacaaggactcgggt
gacgagcggctgcgggagcagctgatcctgcactactcgcccctcgtgaagtacgtggcc
gggcgggtcagcgtcggcctgccgcccaatgtggaacaggccgacttcgtctcctccggg
gtcttcggactcatcgacgccatcgagaagttcgacatcgagcggtccatcaagttcgag
acgtacgcgatcacccggatccggggcgcgatgatcgacgaactgcgggcgctggactgg
atcccgcggtcggttcggcagaaggcgcgggccgtggagcgggcctacgccacgctggag
gcccagttgaggcgtaccccgaccgaggtcgaggtcgcccgtgagatgggtatcgccgtg
gaggaactccacgcggttttcagccagttgtcgctcgccaacgtggtagccctggaagag
ctgctgcacgtcggcggagagggcggcgaccgcctctcgctgatggacaccctggaggac
accgccgccgacaacccggtggaggtcgcggaggaccgcgagctgcggcgactgctggca
cgggccatcaacacgctgcccgagcgggagaagacggtggtgaccctctactactacgag
gggctcacgctcgccgagatcggcaacgtgctcggtgtgacggagagccgcgtcagccag
atccacaccaagtcggtgctccagctgcgggcgaagctggcggacgtcggacgctga
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