Streptomyces sp. ICC4: DRB89_29950
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Entry
DRB89_29950 CDS
T10587
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stic Streptomyces sp. ICC4
Pathway
stic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DRB89_29950 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stic03019
]
DRB89_29950 (recQ)
03400 DNA repair and recombination proteins [BR:
stic03400
]
DRB89_29950 (recQ)
Enzymes [BR:
stic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DRB89_29950 (recQ)
Messenger RNA biogenesis [BR:
stic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DRB89_29950 (recQ)
DNA repair and recombination proteins [BR:
stic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DRB89_29950 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWZ08125
LinkDB
All DBs
Position
6403898..6406045
Genome browser
AA seq
715 aa
AA seq
DB search
MTSSQAAAESPDALQVLHRVFGYDSFRGEQQQIIEHVVDGGDALVLMPTGGGKSLCYQIP
ALVRAGTGVVISPLIALMQDQVDALNALGVRAGFLNSTQGADERRAVEQAFIAGELDLLY
LAPERLRTEGTQRLLDRGTVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIAARLALGEARHFVAGFDRPNIQYRIVAKNNPVKQLLELIRAEHPGDAG
VVYCLSRASVEKTAAALVEQGIDAVAYHAGMDSRTRAANQARFLREDGVVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKMIEGSEGDE
AHRRSLAGHLEAMLALCETVGCRRVRLLAYFGQTGAPDCGNCDTCLTPAESWDGTVASQK
LLSTVWRLAKERRQKFGAGQIVDILQGKKTAKVIQFDHDGLSVFGIGSDLSTAEWRGVVR
QLLALGLLAVEGDYGTLVLTEASGEVLGGRRSVPMRKEAVPAAGSSRKESGGSRSGKGAR
VPVDLPAAAVPVFEALRAWRAETAREQGVPAYVVFHDATLREIATRVPATVDELGTISGV
GEAKLAKYAEGILLTLGETDAAPAAGTGEAPPSAVPAAAARPTAARPAPASSAAASPAPV
TTAPAPASAVPVAVPAQAADRPVPVAAGVSRAPQGEESLFGPGDEEMDPPWDDWE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctcgcaagcagccgccgaaagccccgacgccctccaggtgctccaccgcgtc
ttcgggtacgactccttccgcggcgagcagcagcagatcatcgagcacgtcgtcgacggc
ggcgacgccctggtgctgatgcccaccggcggcggaaaatcgctctgctaccagatcccg
gcgctggtcagagcaggtaccggcgtggtgatctcaccgctgatcgctctgatgcaggac
caggtggacgcgctcaacgcgctcggggtccgggccggattcctcaactcgacccaaggc
gccgacgagcggcgcgcggtggagcaggccttcatcgcgggcgagctcgacctgctctac
ctggctcccgagcggctgcgcaccgagggtacgcagcgcctgctggaccggggcacggtc
tcgctcttcgccatcgacgaggcgcactgcgtcgcccagtggggccacgacttccggccc
gactacctcgccctgtcgatgctgcacgagcgctggccgaaggtgccgcgcatcgcgctg
accgcgaccgccaccgaggcgacgcacgcggagatcgcggcgcgcctggccctgggggag
gcccgccatttcgtggccggcttcgaccggccgaacatccagtaccggatcgtcgcgaag
aacaacccggtcaagcagctgctggagctgatccgggccgagcaccccggcgacgccggc
gtcgtgtactgcctctcgcgggcttccgtggagaagacggccgccgcgctggtggagcag
ggcatcgacgccgtggcgtaccacgccggaatggactcccgcacgcgtgcggcgaaccag
gcgcgcttcctgcgggaggacggggtcgtggtggtggccacgatcgcgttcggcatgggc
atcgacaagccggacgtgcgcttcgtggcgcacctggacctgccgaagtcggtcgagggc
tactaccaggagaccggcagggccgggcgcgacggggagccggccacggcgtggctggcg
tacggcctccaggacgtggtgcagcagcgcaagatgatcgagggctcggagggcgacgag
gcgcaccgccgctccctggccgggcacctcgaggcgatgctcgcgctgtgcgagacggtc
ggctgccgccgggtgcggctgctggcgtacttcgggcagacgggcgcgcccgactgcggc
aactgcgacacctgcctgacgccggccgagtcctgggacgggacggtcgcctcgcagaag
ctgctgtccacggtgtggcggctggccaaggagcggcggcagaagttcggcgccgggcag
atcgtcgacatcctccagggcaagaagacggccaaggtcatccagttcgaccacgacggg
ctctcggtgttcggcatcgggtcggacctgagcaccgcggaatggcgcggggtggttcgg
cagctgctggcgctcgggctgctggcggtggaaggcgactacgggacgctggtgctgacg
gaggccagcggcgaggtcctcgggggccggcggagcgtcccgatgcgcaaggaggcggtg
ccggccgcgggctcgtcccgcaaggagtccggcggatcgcgctccgggaagggcgcgcgg
gtcccggtcgacctgccggcggccgccgtgccggtcttcgaggccctgcgggcgtggcgc
gccgagaccgcgcgggagcagggggtgccggcgtacgtcgtcttccacgacgcgacgctg
cgggagatcgcgacgcgggtgcccgccacggtcgacgagctgggcacgatcagtggtgtc
ggcgaggcgaagctggccaagtacgccgagggcatcctgctgaccctgggcgagacggac
gccgcgcccgcggccgggacgggcgaggcgcccccgagcgccgtgcccgccgccgctgcg
aggcccactgctgcgaggcccgcccctgcgagctccgccgctgcgagccccgcgcccgtg
accaccgcgcccgcccccgcgagcgccgtgcccgtcgccgtgcccgcgcaggccgccgac
cggccggtcccggtcgcggcgggcgtgagccgggctccgcagggggaggagtcgctcttc
ggtccgggggacgaggagatggacccgccctgggacgactgggagtag
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