Streptomyces sp. ICC4: DRB89_32500
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Entry
DRB89_32500 CDS
T10587
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stic Streptomyces sp. ICC4
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stic03009
]
DRB89_32500 (rimO)
Enzymes [BR:
stic01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DRB89_32500 (rimO)
Ribosome biogenesis [BR:
stic03009
]
Prokaryotic type
ribosomal protein modification factors
DRB89_32500 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AWZ08527
LinkDB
All DBs
Position
complement(6925411..6926904)
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AA seq
497 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDAAVALPGHAQEPEAAPADLPEGLAPASGPRAPLR
RRLDKSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIMLVS
ENNTSYGKDLGDIRLLETLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYF
DLSFQHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPTAGVRSNFIVGFPGEKESDFAELE
RFLTHARLDAIGVFGYSDEDGTEAVTYENKLDADTIAERLAHMQRLAEELTSQRAEERIG
ETLEVLVETVVPIDEAEDGEGAYGRAAHQAPETDGQVVFTDGAGLVPGRIVTAKVVGTLG
VDLVAEPLGVDLEEAAG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggatggctgggagctcgtcgaggacgccgcc
gacgcggacgtagccgtcgtcaacacctgcggctttgtcgaagccgccaagaaggactcc
gtagacgccctgctggaggccaacgatctcaaggatcacggccgcacgcaggccgtcgta
gccgtcggctgtatggccgagcgctacggcaaggaactcgccgaagcgctccccgaagcc
gacggtgtcctcggattcgacgactacgccgacatctcggaccgcctccagaccattctc
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggcggagcgccaggacgccgcggtggccctcccgggtcacgcgcaggagcccgaggcg
gcccccgcggacctccccgaggggctcgcgccggcctccgggcctcgcgcaccgctgcgc
cgccgcctggacaagagcccggtcgcctcggtcaagctcgcctccggctgcgaccggcgc
tgctccttctgcgccatcccgtccttccgcggctccttcatctcccgccgccccagcgac
gtgctgggcgagacgcgctggctcgcggagcagggcgtcaaggagatcatgctggtctcc
gagaacaacacctcgtacggcaaggacctgggcgacatccgcctgctggagaccctgctg
cccgagctggccgaggtggacggcatcgagcgcgtccgcgtcagctacctccagcccgcc
gagatgcggcccggcctgatcgacgtgctgacctcgacccccaaggtcgtcccgtacttc
gacctctccttccagcactcggcccccgacgtgctgcgcgccatgcgccgcttcggtgac
accgaccggttcctggagctgctggacaccatccgctccaaggccccgacggccggcgtc
cggtccaacttcatcgtcggcttccccggcgagaaggaatcggacttcgccgagctggag
cgtttcctcacccacgcgcggctcgacgccatcggcgtcttcggctactccgacgaggac
ggcaccgaggccgtcacgtacgagaacaagctggacgccgacaccatcgcggagcgcctg
gcccacatgcagcgcctcgccgaggagctcacctcgcagcgcgcggaggagcggatcggc
gagaccctggaggtgctcgtcgagacggtcgtcccgatcgacgaggcggaggacggcgag
ggagcctacgggcgcgccgcccaccaggcccccgagaccgacggccaggtcgtcttcacc
gacggcgccgggctggtcccggggcgcatcgtcacggcgaaggtggtcggaaccctgggc
gtggacctcgtggccgagcccctgggcgtggatcttgaggaggcggccggatga
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