Streptomyces sp. ID38640: G7Z12_01785
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Entry
G7Z12_01785 CDS
T11207
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
stid Streptomyces sp. ID38640
Pathway
stid00523
Polyketide sugar unit biosynthesis
stid01100
Metabolic pathways
stid01110
Biosynthesis of secondary metabolites
stid01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
stid00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G7Z12_01785 (rfbH)
Enzymes [BR:
stid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
G7Z12_01785 (rfbH)
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QIK04968
UniProt:
A0A6G7SP64
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All DBs
Position
420791..422092
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AA seq
433 aa
AA seq
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MGYIKSDILELVRKYHQEDVTSGFVPGVTPVAASGAVLDEDDRVALVAAALDLKIAAGTS
SRRFERALAKYFGLRKAHLTNSGSSANLLALSALTSPQLEDLRLVPGDEVVTVAAGFPTT
VNPIIQNGLVPVFVDVELGTYNTSPDRIEEAIGPRTRAIMIAHALGNPFAVEEVAEIAND
RGMFLIEDNCDAMGSTYRGRLTGTFGDLATESFYPAHHITMGEGGCVVTDNMVLARIVES
LRDWGRDCWCEPGEDNRCFKRFEQQMGTLPYGYDHKYIFSHVGYNLKSTDLQAALGLTQI
GRIDEFGATRQHNWARLRAGLDGLPHLLLPEPTPDSDPSWFGFVITVREGAPFSTAELID
HLESRRVATRRFFAGNLTRHPAYLEREFRVSGSLTNSDIITERTFWIGVFPGLTDEMIDH
SIRSVTEFVLSRT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggggtacatcaagagtgacattctggagctggtacgcaagtaccaccaggaggacgtc
acgtccggattcgtgccaggggtgacgccggtggcggcttcgggcgcggtcctcgacgag
gacgaccgggtcgcccttgtcgcagcggccctggacctgaagatcgcggccgggaccagt
tcccgcaggttcgagcgcgccctcgccaagtacttcgggctgcggaaggcacatctgacc
aactccggctcgtcggccaacctgctggcgctcagtgcgctgacctcaccccagttggag
gatctgcggctggtgccgggggacgaggtggtcacggtggcagccggtttccccacgacg
gtgaacccgatcattcagaacggtctggtgccggtcttcgtcgatgtcgagctcggcacg
tacaacacctcccccgaccgcatcgaggaggccatcggcccgcgcacccgggccatcatg
atcgcccatgcgctcggcaacccgttcgctgtcgaggaggtcgcggagatcgccaacgac
cgggggatgttcctcatcgaggacaactgcgatgcgatgggcagtacgtaccgcggcagg
ctgacggggaccttcggggacctggcgacggagagcttctatccggcccaccacatcacc
atgggcgagggtgggtgtgtggtgacggacaacatggtgctggcccggatcgtggagtcg
ctgcgggactggggtcgcgactgctggtgcgagcccggtgaggacaatcgctgcttcaag
cggttcgagcagcagatgggcaccctgccgtacggctacgaccacaagtacatcttctcg
cacgtcgggtacaacctgaagtcgaccgacctgcaggccgcgctcgggctcacccagatc
gggaggatcgacgagttcggtgccacccggcagcacaactgggcccggctccgcgccggg
ctggacggcctgccccacctcctgcttcccgagcccacgccggacagtgacccgagctgg
ttcggcttcgtgatcaccgttcgggagggcgcgcccttctcgaccgccgaactgatcgac
cacctggagtcccggcgggtggccacccgccgcttcttcgccggcaacctcacccgccac
ccggcctacctggagcgggagttccgggtgagcgggtcgctgaccaacagcgacatcatc
accgaacgcaccttctggatcggggtgttccccgggctgaccgacgagatgatcgaccac
agcatccgcagcgtcaccgagttcgtcctctcccgcacctga
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