Streptomyces sp. ID38640: G7Z12_03615
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Entry
G7Z12_03615 CDS
T11207
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
stid Streptomyces sp. ID38640
Pathway
stid03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
G7Z12_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stid03400
]
G7Z12_03615
DNA repair and recombination proteins [BR:
stid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
G7Z12_03615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QIK05270
LinkDB
All DBs
Position
897743..898858
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AA seq
371 aa
AA seq
DB search
MRSIWNGSISFGLVTIPVKTYSATDRTSSVSFVRIHDKDGAQIQYRKICELDGEEVPNEE
VGKGYQAPGDDAIVPITDEDLSRLPMPTAKTLSILSFVDPDEIDPLQMDKAYYLGPNGAA
ATKPYALLREALEDHRKVALGKVAMRGRESLAMLRAHNGAIVMHTLLWPDQLRPATGVAP
DEVELRENELTLAETLMDSLGELDPAELHDDYREAVEELVAAKLEGEPVAPAASGTSGAQ
VIDLTAALEKSVRAARGGQEAGTEAEPASVTPIRGRKAAKKGEAEQGAAKKSGAAGKKAT
AKKTASATAKKAPAKKTAAAPKAAGGRAKGTSTAKKTAATGTSTKAASKSTAKKSTAKKT
AARKTSKRSSA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctatatggaatgggtccatatcgttcggtctggtcaccatccccgtgaagacc
tacagcgccaccgaccgcacctcgtcggtgtctttcgtgcgcatccacgataaggacggc
gcacagatccagtaccggaagatctgtgaactggacggcgaggaagtccctaacgaggaa
gtcggcaagggctatcaggcgccgggcgacgacgccatcgtgccgatcaccgacgaggat
ctgtcccggctgccgatgccgaccgccaagacgctgtcgatcctgtcgttcgtcgacccc
gacgagatcgacccgctccagatggacaaggcctactacctggggcccaacggggcggcc
gccaccaagccgtacgcgctgctgcgggaggccctggaggaccaccggaaggtcgcgctc
ggcaaggtggcgatgcggggacgggagtcactggcgatgctgcgggcgcacaacggggcg
atcgtgatgcatacgctgctgtggccggatcagctccggcccgccaccggtgtggcaccc
gacgaggtcgagctccgcgagaacgagctgacactggccgagaccctgatggactccctg
ggcgagctggaccccgcggagctccacgacgactaccgcgaggccgtcgaggagctcgtc
gccgccaagctggagggcgagccggtcgcccccgcggcgtcgggcacgtccggcgcccag
gtcatcgatctcacggcggcgctggagaagagtgtgcgcgcggcccggggaggccaggag
gccggtaccgaggcggagccggcgtccgtgacgcccatacgggggcggaaggcggcgaag
aagggcgaggccgagcagggtgccgccaagaagagcggtgcggccggcaagaaggcaacg
gcgaagaagaccgcctcggccaccgcgaagaaggcgcccgcgaagaagacggcggccgcc
ccgaaggccgccggcgggcgggcgaagggcacatcgacggccaagaagaccgcagccacc
ggtacttccacgaaggccgcgtcgaagagcactgccaagaagagcaccgccaagaagacc
gcggccaggaaaacgagcaagaggtcgtccgcgtag
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