Streptomyces sp. ID38640: G7Z12_08850
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Entry
G7Z12_08850 CDS
T11207
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stid Streptomyces sp. ID38640
Brite
KEGG Orthology (KO) [BR:
stid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stid03021
]
G7Z12_08850
Transcription machinery [BR:
stid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7Z12_08850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
PF0610-like_N
DUF7343
MarR
HTH_3
HTH_38
HTH_37
Sigma70_ECF
GerE
Annexin_2
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QIK06117
LinkDB
All DBs
Position
complement(2127792..2128652)
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AA seq
286 aa
AA seq
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MTTIVSETTTEQRQTHTASALPEVTQPQKVAPRDARELSKQFFERLQVLEEGTHEYQYAR
NTLIEMNMSMVRYVARRYRNRGDDMEDVIQVGTIGLIKAIDRFDLAREVEFSTFAVPYIL
GEIKRFFRDTGWAVHVPRRLQELRSDLAKAKEHLAAELDRDPTVRELAAHLDLSEDDVIE
GIVAANGYTAGSLDTPADPDPSEQRRTLVDVLGENDPALEAVEDFHVLAPLLGMLDARER
RLIELRFGQEMTQSQIGEELGVSQMHVSRLLTRTLSKLRAGMLTER
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcgtgagcgagaccacgaccgagcagcgacagacccacacggcctctgca
ctgccggaggtgacgcaaccgcagaaggtggctcctcgcgacgcgagggagttgtcgaag
cagttcttcgagcggcttcaggttctcgaagagggcacgcacgagtaccagtacgcgcgt
aacaccctcatcgagatgaatatgtcgatggtgcgctatgtcgcccgccgctaccgcaat
cgcggcgacgacatggaagacgtcatccaggtggggaccatcggtctgatcaaggccatc
gaccggttcgacctcgcgcgtgaggtggagttctccacctttgccgtcccctacatcctg
ggcgagatcaagcggttcttccgtgacaccggctgggccgtccatgtgccccgccgcctt
caggagctgcgcagcgacctggccaaggccaaggagcacctcgccgccgagctcgaccgc
gaccccaccgtccgcgaactggccgcccacctcgatctgtcggaggacgacgtcatcgag
ggcatcgtcgccgccaacggctacaccgccggttcgctcgacacgcccgccgaccccgac
ccgtcggagcagcgccgcactctcgtcgacgtcctgggggagaacgacccggcgctggag
gccgtagaggacttccatgtgctcgctccgctgctcggcatgctcgacgcccgggagcgg
cgcctcatcgagctgcgcttcggtcaggagatgacccagtcgcagatcggcgaggagctc
ggtgtgtcccagatgcatgtctcccggctgctcacccgcaccctgtcgaagcttcgtgcc
ggcatgctcaccgaacgctga
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