Streptomyces sp. ID38640: G7Z12_11935
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Entry
G7Z12_11935 CDS
T11207
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stid Streptomyces sp. ID38640
Brite
KEGG Orthology (KO) [BR:
stid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stid03021
]
G7Z12_11935
Transcription machinery [BR:
stid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7Z12_11935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PF0610-like_N
HTH_23
DUF7343
MarR_2
Sigma70_ECF
HTH_24
MarR
HTH_Crp_2
NirdL-like_HTH
HTH_3
IF2_N
HTH_ParB
HTH_AraC
DinB_2
GerE
Motif
Other DBs
NCBI-ProteinID:
QIK11239
LinkDB
All DBs
Position
2881039..2881998
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AA seq
319 aa
AA seq
DB search
MASSATIPEQQARPHPVGVDDHGGRLDAAEQAERADHMEQSEQPGQQAHQHDAPAPDDKL
QEQQHSPEPQDRSGARAMFYELRKLPDGSPERAELRNTLVRMHLPLVEHLARRFRNRGEP
LDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELR
LSLTTATAELSQRHGRAPTVHELAEHLAISEEEVLEGLESANAYSTLSLDVPDTDDESPA
VADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQMHV
SRLLARTLAQLRDKLLVEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtgcgaccatccccgagcagcaggcccggccgcatccggtgggcgtagac
gaccacggcggccggttggatgcggcggagcaggcagagcgggcggaccacatggagcag
agcgagcagccggggcagcaggcgcatcagcacgatgcgccggcccccgacgacaagctg
caggaacaacagcattccccggagccgcaggaccgcagcggcgcccgggcgatgttctac
gagctgcgcaagctgcccgacggctccccggagcgtgccgagctgcgcaacaccctggtt
cgtatgcacctccccctcgtcgagcatctggcccggcggttccgtaaccgcggcgagccg
ctggacgatctgacccaggtcgccaccatcggcctgatcaagtccgtcgaccgcttcgac
ccggagcgcggcgtggagttctccacgtacgccacccccaccgtcgtcggcgagatcaag
cggcacttccgcgacaagggctgggcggtccgcgtcccgcgtcgcctccaggagctgcgg
ctgtcgctgaccaccgcgaccgccgagctgtcccagcggcacgggcgggcgcccacggtc
catgagctggccgagcatctggcgatctccgaggaggaggtcctggagggcctggagtcc
gccaacgcctacagcaccctctccctcgacgtcccggacacggacgacgagtccccggcc
gtcgccgacaccctcggcgccgaggacgaggcgctggaaggggtggagtaccgcgagtcc
ctcaagccgctgctggaggatctcccgccgcgtgagaagaagatcctgctgctgcgcttc
ttcggcaacatgacccagtcgcagatcgcccaggaggtcggcatctcccagatgcatgtc
tcccgcctgctggcccgcaccctcgcccagctccgcgacaagctgctcgtcgaggagtga
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