Streptomyces sp. ID38640: G7Z12_16515
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Entry
G7Z12_16515 CDS
T11207
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stid Streptomyces sp. ID38640
Brite
KEGG Orthology (KO) [BR:
stid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stid03032
]
G7Z12_16515 (topA)
03400 DNA repair and recombination proteins [BR:
stid03400
]
G7Z12_16515 (topA)
Enzymes [BR:
stid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G7Z12_16515 (topA)
DNA replication proteins [BR:
stid03032
]
Prokaryotic type
DNA Topoisomerases
G7Z12_16515 (topA)
DNA repair and recombination proteins [BR:
stid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G7Z12_16515 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIK07403
UniProt:
A0A6G7SVU3
LinkDB
All DBs
Position
complement(3920918..3923755)
Genome browser
AA seq
945 aa
AA seq
DB search
MSPTSETTDGGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPAKYKG
EPWARLGVNVDADFQPIYVVNSDKKDQVKKLKELLAESDELYLATDEDREGEAIAWHLQE
ILKPKVPVHRMVFHEITKDAIREAVANPRDLNQKLVDAQETRRILDRLYGYEVSPVLWKK
VMPRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDASDPSTLTARLNT
VDGRRIAQGRDFGPNGQLKNDVLHLDEANARALAAALENTDFAVRSVESKPYRRSPYAPF
RTTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSDTAVAAARAQVTHLYG
ANYLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQM
KDATGNSVTVKIGGRAADGRDAEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQ
VAEGDALAAQEITADGHATKPPARYTEATLVKELEEREIGRPSTYASIIGTILDRGYVFK
KGTALVPSFLSFAVVNLLEKHFGRLVDYSFTAKMEDDLDRIARGEAQSVPWLRRFYFGQG
HGEGGAADAGNGDGDHLGGLKELVEDLGAIDAREISSFPVSEDIKLRVGRYGPYVERGEK
DAEGHQRADVPDDLAPDELTVEYAEELLAKPSGDFELGMDPVSGHQIVAKDGRYGPYVTE
ILPEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALKLMSLPRVVGKDPEGVEITAQNGR
YGPYLKKGTDSRSLESEEQLFSITVDEALAIYAQPKQRGRAAAKPPLKELGTDPVSGKPV
VVKDGRFGAYVTDGETNATLRRDDDVETVTAERGYELLAEKRAKGPAKKTAKKAAKKAPA
KKTAAKKTAAKKTAAKKTTTAKKTTAKKATAKTAAAKKTAASAED
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccacagacggcggcggccgccgactcgtcatcgtcgagtcg
cctgccaaggcgaagacgatcaagggctacctcggccctggctacgtggtcgaggccagc
gtcggacacatccgcgatctgcccaacggcgccgcagaggtcccggcgaagtacaagggc
gagccctgggcccgcctcggcgtgaacgtcgacgccgacttccagccgatctacgtcgtc
aacagtgacaagaaggaccaggtcaagaagctcaaggagctgctggccgagtccgacgag
ctctacctcgccacagatgaggaccgcgagggcgaggccatcgcctggcacctccaggag
atcctcaagcccaaggtccccgtccaccggatggtcttccacgagatcaccaaggacgcg
atccgcgaggccgtcgccaatccgcgcgatctgaaccagaagctggtcgacgcccaggag
acccgccgtatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaag
gtcatgccccggctgtcggccggccgggtgcagtccgtcgcgacccgtctcgtcgtcgag
cgggagcgcgagcgcatcgccttccgctccgccgagtactgggatctgaccggcacgttc
gccaccggccgggccggggacgccagcgacccctcgacgctgaccgcacggctgaacacc
gtcgacggccgccgtatcgcccagggccgcgacttcggccccaacgggcagctcaagaac
gatgtgctccatctggacgaggcgaacgcccgcgcgctcgccgccgccctggagaacacc
gacttcgcggtgcgctcggtcgagtccaagccctaccgccgctcgccgtacgccccgttc
cgtacgaccaccctccagcaggaggccagccgcaagctcggcttcggcgccaaggccacc
atgcaggtggcgcagaagctgtacgagaacggctacatcacctatatgcgtacggactcc
accacgctctcggacaccgcggtcgccgcggcccgggcgcaggtgacgcatctgtacggc
gcgaactatctgccggacaagccgcgcacctacgccggcaaggtcaagaacgcccaggag
gcgcacgaggcgatccgcccctccggcgaccgcttccgcaccccggccgagaccggtctg
accggcgaccagttcaagctctacgagctgatctggaagcggaccgtcgcctcccagatg
aaggacgcgaccggtaactccgtcaccgtcaagatcggtggccgggccgccgacggccgg
gacgccgagttcagcgcgtccggcaagaccatcaccttccacggcttcctcaaggcctat
gtggagggcgccgacgaccccaacgccgagctcgacgaccgcgagcgccggctgccgcag
gtcgccgagggcgatgcgctggccgcgcaggagatcaccgccgacgggcacgccaccaag
ccgcccgcccgctacaccgaggccacgctggtcaaggagctggaagagcgcgagatcggc
cgaccgtcgacctatgcgtcgatcatcggcacgatcctcgaccgcggttatgtcttcaag
aagggcaccgcgctcgtcccgtccttcctgtccttcgcggtggtcaacctcctggagaag
cacttcggccggctggtcgactacagcttcaccgccaagatggaggacgacctcgaccgc
atcgcccgcggtgaggcgcagtccgtgccgtggctgcggcgcttctacttcggtcagggc
cacggcgagggcggtgccgcggacgccggcaacggcgacggcgaccacctcggcgggctc
aaggaactggtcgaggacctgggcgcgatcgacgcccgggagatctcgtccttcccggtc
agcgaggacatcaagctgcgggtcggccgctacggcccgtatgtggagcgcggggagaag
gacgccgagggccaccagcgcgccgacgtccccgacgacctggcgcccgacgagctgacc
gtggagtacgcggaggagctgctcgccaagccgagcggcgacttcgagctgggcatggac
ccggtcagcggccaccagatcgtcgccaaggacggccgctacggcccgtacgtcaccgag
atcctgcccgagggcaccccgaagaccggcaagaacgcggtcaagccgcgcaccgcctcg
ctcttcaagtcgatgtccctggacacggtgacgctggaggacgcgctcaagctgatgtcg
ctgccgcgcgtcgtcggcaaggaccccgagggcgtggagatcaccgcgcagaacggccgc
tacggcccgtacctcaagaagggcaccgactcgcgctccctggagagcgaggagcagctc
ttctcgatcaccgtcgacgaggcgctggcgatctacgcccagcccaagcagcgcggacgg
gccgccgccaagccgccgctgaaggagctgggcacggacccggtcagcggcaagccggtg
gtggtcaaggacggccggttcggtgcgtatgtcaccgacggcgagaccaatgcgacgctg
cggcgggacgacgacgtcgagacggtcaccgccgagcggggctacgagctgctcgcggag
aagcgcgccaaggggccggcgaagaagaccgcgaagaaggcggccaagaaggcgccggcc
aagaagacggccgcgaagaagacggccgccaagaagaccgcggcgaagaagacgaccacg
gcgaagaagacgaccgccaagaaggccaccgcgaagacggcggcggccaagaagacggcg
gcgtcggccgaggactga
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