Streptomyces sp. ID38640: G7Z12_17365
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Entry
G7Z12_17365 CDS
T11207
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stid Streptomyces sp. ID38640
Brite
KEGG Orthology (KO) [BR:
stid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stid03021
]
G7Z12_17365
Transcription machinery [BR:
stid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7Z12_17365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
HTH_3
HTH_24
DUF7343
DUF134
HTH_5
MarR
NMB0315_dom_I
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QIK07545
LinkDB
All DBs
Position
4103768..4104577
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AA seq
269 aa
AA seq
DB search
MTVTARTAPKAPSRESRSADTRALTQVLFAELTDLEPGTPEHTRVRAALIEANLPLVRYA
AARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTV
HVPRRLHELWVQVNGATEDLTVLHGRSPTTAEIAERLKIGEDEVLACLEAGRSYHATSLE
AAQEGDGLPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQIS
AELGVSQMHVSRLLSRSFARLRSANRIDA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgacggcccgtactgcgcccaaggctccatcccgcgagagccgaagcgcggac
acgcgggcgctcacgcaggtgctgttcgcggaactgacggacctcgaacccggcacgccg
gagcacacacgggtccgcgccgcgctgatcgaggccaatctgccgctggtccgctatgcc
gcggcgcgcttccgcagccgcaatgagccgatggaggacgtcatccaggtcggcaccatc
ggcctgatcaatgcgatcgaccggttcgatccggaccgcggcgtccagttccccaccttc
gcgatgcctactgtcgtcggcgagatcaaacgctactttcgagacaatgtccgcacggtc
catgtgccccgccgactccacgagctgtgggtgcaggtcaacggcgcgaccgaggacctg
accgtgctgcacggccgctcccccaccaccgccgagatcgccgagcggctgaagatcggc
gaggacgaggtactggcctgcctggaggcgggccgctcgtatcacgccacctcgctggag
gccgcacaggagggcgacggcctgcccggcctgctcgaccgcctcggatacgaggacccg
gagctggccggcgtcgagcaccgcgacctcgtacggcacctcctcgtccagctgcccgag
cgcgagcagcggatcctcctgctgcgttactacagcaatctgacgcagtcgcagatcagt
gcggaactaggggtgtcgcagatgcatgtctcgcggctactgtcgcggagcttcgcccgg
ctgcgatccgcaaacaggatcgacgcctaa
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