Streptomyces sp. ID38640: G7Z12_17370
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Entry
G7Z12_17370 CDS
T11207
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stid Streptomyces sp. ID38640
Brite
KEGG Orthology (KO) [BR:
stid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stid03021
]
G7Z12_17370
Transcription machinery [BR:
stid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7Z12_17370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
DUF7343
Sigma70_ECF
MarR
HTH_24
DUF134
Motif
Other DBs
NCBI-ProteinID:
QIK07546
LinkDB
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Position
4104776..4105612
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AA seq
278 aa
AA seq
DB search
MSVELGSSKVLPAIPAPAPHVHDDDAINTRTLSRSLFLRLASLDKDCAERTYVRDTLIEL
NLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRF
FRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVPELALCLGVSEEDVVDGLAVGN
AYTASSLDSPSPEDDGGEGSLADRLGYEDSALEGVEYRESLKPLLAKLPARERQIIMLRF
FANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctcgaaggtgcttcccgcgattcccgcgcccgcaccgcac
gtgcatgacgacgacgccatcaatacccgcacgctctcccgctccctgttcctgcggctg
gcctcgctcgacaaggactgcgcggagcgtacgtacgtacgcgacacgctcatcgagctg
aaccttccgctcgtccgctatgcggccgcccgattccgcagccgcaacgagccgatggag
gacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccgtttcgattgcgaa
cgcggcgtggaattcccgacgttcgcgatgcctaccgtggtcggcgagatcaagcgcttc
ttccgcgacacctcgtggtcggtgcgggtcccgcgccggctccaggagctgcggctcgcc
ctcaccaaggccagtgacgagctctcccagaagctggaccgctccccgaccgttcccgaa
ctggccctgtgcctgggggtgtcggaggaggacgtggtcgacgggctggccgtcggcaac
gcctacaccgcctcctcgctcgactccccctcccccgaggacgacggcggcgagggctcc
ctcgcggaccgcctcggctacgaggacagcgccctggaaggcgtggagtaccgcgagtcc
ctcaagccgctgctggccaaactcccggcccgtgagcgccagatcatcatgctgcgcttc
ttcgccaacatgacgcagtcccagatcggcgaggaggtcggcatctcccagatgcatgtc
tcccggttgctcacccgcaccctggcgcagctgcgcgagggcctcatctccgactga
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