Streptomyces sp. ICC1: DRB96_05135
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Entry
DRB96_05135 CDS
T10586
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stii Streptomyces sp. ICC1
Pathway
stii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DRB96_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stii03400
]
DRB96_05135
Enzymes [BR:
stii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DRB96_05135
DNA repair and recombination proteins [BR:
stii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DRB96_05135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
NAT10_TcmA_helicase
PIF1
AAA_16
NPHP3_N
PhoH
nSTAND3
DEAD
HTH_IclR
DUF87
TrwB_AAD_bind
AAA
SLFN-g3_helicase
NACHT
ATPase_2
ABC_tran
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AWZ11802
LinkDB
All DBs
Position
complement(1095955..1098198)
Genome browser
AA seq
747 aa
AA seq
DB search
MTTNAAVSSAVVEGVLERITYANEESGYTIARVDTGRGAGDLLTVVGSLLGAQPGESLRM
EGRWGSHPQYGRQFTVENYTTLLPATIQGIRRYLGSGLIKGIGPKIADRIVEHFGTDTLD
VIEEQPKRLIEVPGLGPKRTRMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYADA
SISVVKNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCFL
PEDRLISDGVKLLQVDTGLVIDCLAELAADPEGVVRESVPDPAGGPDLTAVYLVPFHRAE
LSLVGQVRRLLNTEEDRMPAFQDVDWDKALGWLAGRTGAKLAPGQRDAVRLALTRRVAVL
TGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGG
DAAYDRERPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLR
DLLAEGGPVPAVRLTTIFRQAQQSGVVTNAHRINTGLPPITDGLPDFFLFPEEDTEEAGK
LAVDVAARRIPARFGLDPRRDIQVLAPMHRGPAGAGNLNGLLQQAITPARPNLPEKRFGG
RVFRVGDKVTQIRNNYDKGANGVFNGTVGVVTGLDLDEQRLTVRTDEDEEVAYEFGELDE
LAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRKALAQA
VRTVSAGRRYTAVAARLSGRIPVGNIT
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaacgcggcggtgtcgtcggcagtggtcgagggggtgctcgagcgcatcacc
tacgccaatgaggagagcggctacacgatcgcccgggtcgacaccggccggggcgcgggc
gatctgctcaccgtcgtgggctccctgctgggggcccagccgggtgaatcgctgcgcatg
gagggccgttggggctcccacccgcagtacggcaggcagttcaccgtcgagaactacacg
accctgctgcccgcgaccatccagggcatccggcgctacctgggctccggcctgatcaag
ggcatcggcccgaagatcgccgaccggatcgtggagcacttcggcaccgacaccctggac
gtcatcgaggagcagccgaagcggctgatcgaagtgcccgggctcggccccaagcggacc
aggatgatcggcgccgcctgggaggagcagaaggccatcaaggaggtcatggtcttcctc
cagggggtcggcgtctccacctccatcgcggtccgcatctacaagaagtacgccgacgcc
tccatctccgtggtgaagaaccagccgtaccggctcgccgccgacgtctggggcatcggc
ttcctcaccgccgaccggatcgcgcaggccgtcggcatcccgcacgacagccccgagcgg
gtcaaggcgggcctccagtacgccctgtcccagtccaccgaccaggggcactgcttcctg
cccgaggaccggctcatctccgacggggtcaagctgctccaggtggacaccgggctggtc
atcgactgcctggccgagctcgccgccgatcccgaaggggtcgtacgggaatccgtaccg
gatccggcgggcggaccggacctcaccgcggtgtacctggtgccgttccaccgcgccgag
ctgtccctggtcggccaggtgcgccggctcctgaacacggaggaggaccggatgccggcc
ttccaggacgtggactgggacaaggccctgggctggctcgccggccggaccggcgcgaaa
ctggcccccgggcagcgggacgcggtccgtctcgccctcacccgccgggtcgcggtcctc
acgggcgggccgggctgcggcaagtccttcaccgtccgctcgatcgtggagctggcccgc
gccaagaaggccaaggtggtgctcgccgcccccaccggccgcgcggcgaagcggctggcc
gagctcacgggggccgaggcctccaccgtccaccggctgctggaactcaaacccggcggg
gacgcggcgtacgaccgggagcggccgctcgacgcggacctcgtcgtcgtcgacgaggcc
tcgatgctcgacctgctgctggcgaacaagctggtcaaggccgtggcaccaggcgcccac
ctgctgctcgtcggggacgtggaccagctgccctcggtcggcgcgggggaggtgctgcgc
gatctcctcgccgagggcgggccggtccccgccgtccggctgaccaccatcttccgccag
gcccagcagtccggcgtggtcaccaacgcccaccggatcaacaccggcctgccgccgatc
accgacgggctgcccgacttcttcctcttccccgaagaggacaccgaagaggccggaaag
ctcgccgtcgacgtcgccgcacgacgtattccggccagattcgggctcgacccgcggcgc
gacatccaggtcctcgcccccatgcaccggggcccggccggcgcggggaacctcaacggc
ctgctccagcaggccatcacccccgcccggccgaacctgcccgagaaacggttcggcggc
cgcgtcttccgggtgggcgacaaggtcacccagatccgcaacaactacgacaagggcgcc
aacggcgtcttcaacggcaccgtcggcgtggtcaccggcctcgacctggacgaacagcgc
ctgacggtgcgcacggacgaagacgaggaagtggcctacgagttcggcgagctcgatgag
ctcgcccacgcgtacgccgtcaccatccaccgctcccaggggagcgaatacccggccgtc
gtgatccccgtcaccaccggggcttggatgatgctccagcgaaatctgctctacacggcg
gtgaccagggcgaagaaactggtcgtcctcgtcgggtcccgcaaagcccttgcccaggcg
gtgcgtacggtttccgcaggcaggaggtacacagccgtcgccgctcggctctcgggacgc
ataccggtgggaaacatcacctag
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