Streptomyces sp. ICC1: DRB96_20140
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Entry
DRB96_20140 CDS
T10586
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
stii Streptomyces sp. ICC1
Pathway
stii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DRB96_20140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stii03400
]
DRB96_20140
Enzymes [BR:
stii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DRB96_20140
DNA repair and recombination proteins [BR:
stii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DRB96_20140
Prokaryotic type
DRB96_20140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWZ14190
LinkDB
All DBs
Position
complement(4268212..4268898)
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AA seq
228 aa
AA seq
DB search
MASRPLNEIVEPGWARALEPVATQIAAMGDFLRAEIAAGRTYVPAGANVLRAFQQPFDEV
KVLIVGQDPYPTPGHAIGLSFSVAPEVSPWPPSLDNIFRELHADLGTGRPRSGDLTPWTR
QGVLLLNRSLTTAPRKPNAHRGKGWEAVTEQAIRALAARGKPLVSVLWGREARNLRPLLG
ELPAVESVHPSPMSADNGFFGSRPFSRTNDLLVRQGAQPVDWRLPAAG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcacgaccgttgaacgagatcgtcgagccgggctgggcccgcgctctggagccg
gtggcgacgcagatcgccgccatgggcgacttcctgcgcgcggagatcgcggcgggccgg
acctacgtcccggccggagcgaacgtcctgcgtgcgttccagcagcccttcgacgaggtg
aaggtgctgatcgtcgggcaggacccgtacccgacaccggggcacgcgatcggcctctcc
ttctcggtggcgcccgaagtgagcccgtggccaccgagcctggacaacatcttccgcgag
ctgcacgccgacctcgggacgggccggccccggagcggggatctgaccccgtggacccgg
cagggcgtcctgctgctcaaccgctcgctcaccacggccccgcgcaagcccaacgcccac
cgcggcaagggctgggaggccgtgaccgagcaggccatccgcgcgctcgcggcgcgcggg
aagcccttggtgtcggtgttgtgggggcgcgaggcccgcaatctgcggccgctgctgggc
gagctgccggccgtggagtcggtgcacccctcccccatgtccgcggacaacgggttcttc
ggctccaggccgttcagcaggaccaacgacctgctggtccgccagggcgcgcagcccgtg
gactggcggctgcccgccgccggttga
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