Streptomyces sp. ICC1: DRB96_25695
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Entry
DRB96_25695 CDS
T10586
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
stii Streptomyces sp. ICC1
Pathway
stii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DRB96_25695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stii03021
]
DRB96_25695
03400 DNA repair and recombination proteins [BR:
stii03400
]
DRB96_25695
Enzymes [BR:
stii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DRB96_25695
Transcription machinery [BR:
stii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DRB96_25695
DNA repair and recombination proteins [BR:
stii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DRB96_25695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AWZ15089
UniProt:
A0A2Z4V2U6
LinkDB
All DBs
Position
complement(5451043..5454942)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDDERRTRDLPSLEAHVSVERQQIENRRDADLEGRAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWARFKNLKVQDLEGDELL
YRELRDRFGTYFDGCMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNKPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDVKGE
GRAFGSTAEATMAFDNGELALQSAVDIRFPVGTIPPRGWVPPVAEEGEQEFQQGDQFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKAIVKGYEELDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLKIAVRG
EDGALRKSDDVETSIYARMLAEDVVIDGKVIAPANVDLGDVLIDALVANGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKIVIMPDDGSEETAFPISKRAKV
IVGEGDHVEVGQKLTMGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLARYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNG
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cgaacctggtcccacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgttgtggcgtc
gaagtcacgcgcgccaaggtgcgccgcgagcggatgggccacatcgagcttgccgctccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctcggatacctgctggacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gacgagcgccgcacccgcgacctcccgtccctggaggcgcacgtctccgtcgagcgccag
cagatcgagaaccgccgcgacgcggacctcgaaggccgtgccaagaagctcgagaccgac
ctggccgagcttgaggccgagggcgcgaaggccgacgtacgccgcaaggtgcgcgaaggt
gccgagcgcgagatgaagcagctccgtgaccgcgcccagcgcgagatcgaccgcctcgac
gaggtgtgggcccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctgcatgggcgccgccgcg
ctgcagaagcgcctggagtccttcgacctcgacgaagaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacaagcccaagggcatggttctggactgcgtgccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgccttctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggacgcc
ctcttcgacaacggtcgtcgtggtcgtccggtgaccggtcccggcaaccgtcccctgaag
tccctcagcgacatgctgaagggcaagcagggtcgattccgccagaacctcctcggcaag
cgcgtggactactccgcgcgttccgtgatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggcgaagcgcatggtcgagcgcggccgc
acggtcgtctacgacgtgctcgaagaggtcatcgccgagcacccggttctcctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccccagctggtcgaaggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctttcggcagaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggcagacggtcgtcccgtcaccatgccgacccaggac
atggtgctgggtctgttcttcctcaccaccgacggcgagctccgtgacgtcaagggcgag
ggccgcgcgttcggctccacggccgaggcgaccatggcgttcgacaacggtgagctcgcg
ctccagtcggccgtcgacatccgcttcccggtgggcaccatcccgccgcgcggctgggtg
cccccggtcgccgaagagggcgagcaggagttccagcagggcgaccagttccggctgcgc
accaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggcggagcgctacccc
aaggtgatcgtggcggcgacgctcgacaacctgaaggcggccggcttccactgggcgacc
cgttcgggcgtcaccgtggccatctccgacgtcgtcgtgcccgaggccaagaaggccatc
gtcaagggctacgaggagctggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcgacagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcgtccttccgtgagggcctcacc
gttctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctcacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggtctgaagctgaagatcgccgttcgcggc
gaggacggcgcgctgcgcaagtccgacgacgtcgagacctcgatctacgcccgcatgctg
gccgaggacgtcgtcatcgacggcaaggtcatcgcgccggccaacgtcgacctcggtgac
gtcctgatcgacgccctggtcgccaacggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggacgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacg
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggccgccggccgcgtgcggatcgaggagaccgagaagacgaagaagatcgtc
atcatgcccgacgacggcagcgaggagacggccttcccgatctccaagcgcgccaaggtc
atcgtcggcgagggcgaccacgtcgaggtcggccagaagctgaccatgggtgccaccaac
ccgcacgacgtgctgcgcatcctcggccagcgtgcggtccaggtccacctggtcggcgaa
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggagctcctgccg
ggcgagctcgtcgagcggtcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctcgcgacc
gagtcgtggctgtcggcggcgtccttccaggagacgaccagggttctgacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctcgcccgctaccgcaacatccgggtcgagccgaccgaggaa
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgcccttcggc
accggctccggccaggctgttccgctggaggactacgactacggcccctacaacggctga
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