Streptomyces sp. ICC1: DRB96_38865
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Entry
DRB96_38865 CDS
T10586
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stii Streptomyces sp. ICC1
Pathway
stii03030
DNA replication
stii03430
Mismatch repair
stii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DRB96_38865
03430 Mismatch repair
DRB96_38865
03440 Homologous recombination
DRB96_38865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stii03032
]
DRB96_38865
03400 DNA repair and recombination proteins [BR:
stii03400
]
DRB96_38865
Enzymes [BR:
stii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DRB96_38865
DNA replication proteins [BR:
stii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DRB96_38865
DNA repair and recombination proteins [BR:
stii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DRB96_38865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
Alpha-amylase
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
hDGE_amylase
DUF655
Motif
Other DBs
NCBI-ProteinID:
AWZ17133
LinkDB
All DBs
Position
complement(8288666..8293411)
Genome browser
AA seq
1581 aa
AA seq
DB search
MTHELTANRLARASSNATASGGWWRDAVIYQVYVRSFADSDGDGVGDLRGVRERLPHLAR
LGVDAVWLTPFYVSPQADGGYDVADYRAVDPLFGDLSDADALVRSAHALGLRVIVDVVPN
HTSEEHPWFRAALAGAPGARDLYHFRPGRGPGGAAPPNDWESVFGGPAWTRVADGEWYLH
LFAPEQPDLNWDRPEVAEEFSSVLRFWLDLGVDGFRVDVAHGMVKAPGLPDIGRGAQATL
IGTEPLPFFDQDGVHEIHRSWRRLLDSYEGPRIGVAEAWAPTSERLALYVRPDELHQAFN
FRFLNCPWDAAAMRTVVDESLAAASSSSRRSRSFAPNTLTPTPSSSPSAPRTARSPPPSS
RTAPRTPSDSPRASPTPNPTTSRAARRLAAAPLSPPEAPTVTKTPFTHLHVHTQYSLLDG
AARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAKKAGVTPIIGIEAYVAPESRRNK
RRIQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFRLSSDAYAEGWLTKWPRMDKET
ISQWSEGLIASTGCPSGELQTRLRLGQFDEALKAASEYQDIFGKDRYFLELMDHGIEIER
RVRDGLLEVGKKLGIPPLVTNDSHYTYAHESAAHDALLCIQTGKNLSDPDRFRFDGTGYY
LKSTEEMYAVDSSDAWQEGCRNTLLVAEQIDTTGMFEAKNLMPKFEIPEEGYTEITWFKE
EVRRGMARRYPGGVPEDRQKQAEYELDVIIQMGFPGYFLVVADFIMWAKNQGIAVGPGRG
SAAGSIVAYAMGITDLDPITHGLIFERFLNPERVSMPDVDIDFDERRRVEVIRYVTDKYG
DDKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMPADVLGKGIDLNGITDPSHP
RYGEAGEIRAMYENEPDVKKVIDTARGVEGLVRQMGVHAAGVIMSSEPIVDHAPVWVRHT
DGVTITQWDYPQCESLGLIKMDFLGLRNLTIMDDAVKMVKANKGIDLDLLGLPLDDPKTY
ELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALYRPGPMGMNSHTNYALRKNK
QQEITPIHPELEEPLREILGVTYGLIVYQEQVQKGAQIIAGYSLGEADILRRVMGKKKPE
ELAKNFVIFEAGAKAKGFSDQAIKALWDVLVPFAGYAFNKAHSAAYGLVSYWTAYLKANF
PAEYMAGLLTSVKDDKDKSAIYLNECRRMGIKVLLPNVNESEPNFAAQGDDVILFGLTAV
RNVGTNVVESIIKSRKAKGKYSSFPDFLDKVEAVVCNKRTVESLIKAGAFDEMGHTRKGL
VAHHEPMIDNVVAVKRKEAEGQFDLFGGMGDESASDEPGFGLDVEFSDVEWEKSYLLAQE
REMLGLYVSDHPLFGLEHVLSDKTDAGISQLTGGEHSDGAVVTIGGIISGLQRKMTKQGN
AWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRLDKREDVPRLVAMEMMVPD
LSNAGTNAPVVLTIPTVKVTPPMVTRLGEILRHHQGNSEVRIKLQGPRTTTVLRLDKHRV
KPDPALFGDLKVLLGPSCLAG
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgagttgacggcgaaccggcttgcaagagcttccagcaacgccaccgcgagc
ggcggctggtggcgcgatgccgtcatctaccaggtgtacgtgcgctccttcgccgacagc
gacggcgacggcgtcggggacctgcgcggggtccgcgagcgcctcccccacctggcccgg
ctcggggtcgacgcggtgtggctgacccccttctacgtctccccccaggcggacggcggc
tacgacgtcgccgactaccgggccgtcgacccgctcttcggggacctctccgacgccgac
gccctcgtccgctccgcccacgcgctgggtctgcgcgtcatcgtggacgtggtgccgaac
cacacctccgaggagcacccctggttccgggcggccctggccggcgctcccggggcccgg
gacctctaccacttccgccccgggcgcggccccggcggcgccgcgccgcccaacgactgg
gagtccgtcttcggcgggccggcctggacccgggtcgccgacggggagtggtacctgcac
ctcttcgcccccgagcagcccgatctgaactgggaccgcccggaggtcgccgaggagttc
tcctccgtcctgcggttctggctcgacctcggcgtcgacggcttccgcgtcgacgtggcc
cacggcatggtcaaggccccggggctgccggacatcggccgcggcgcacaggccacgctg
atcggcaccgagccgctccccttcttcgatcaggacggggtccacgagatccaccgctcc
tggcggcggctgctcgactcctacgagggcccgcggatcggggtcgccgaggcctgggcg
cccacctcggagcggctcgcgctgtacgtccgccccgacgagctgcaccaggccttcaac
ttccggttcctgaactgcccgtgggacgcggcggcgatgcggaccgtcgtagacgagtcg
ctggccgccgcctcctcctcgtccaggcgctcgcgaagcttcgcaccgaacaccctgacc
cccaccccttcgtcttcgccaagcgcgccgagaacggcccgctcgcccccgccctcgagc
cgtacggcccccaggacgccgtccgattcgccaagggcatccccgacgccgaacccgacg
acctcgcgcgcagcgcgcaggttggctgccgcccctctctccccgccggaggcccccacc
gtgaccaagacgccgttcacgcacctgcacgtccacacccagtactccctgctggacggt
gccgcgcggctcaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcctacgacttcttccacacggcgaagaaggcc
ggggtcacgccgatcatcggcatcgaggcctacgtcgccccggagtcccggcgcaacaag
cggcgcatccagtggggccagccccaccagaagcgcgacgacgtctccggttccggcggc
tacacgcacaagacgatctgggcggcgaactccaccggcctgcacaacctcttccggctg
tcctccgacgcgtacgccgagggctggctcacgaagtggccgcgcatggacaaggagacc
atctcccagtggtccgaaggcctgatcgcctccaccggctgcccctccggtgagctgcag
accaggctgcgcctcggccagttcgacgaggccctgaaggccgcctccgaataccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacgggctgctggaggtcggcaagaagctcggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgcacgagtcggccgcgcacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggtaccggctactac
ctcaagtccacggaggagatgtacgccgtcgactcctcggacgcctggcaggaggggtgt
cgcaacaccctcctggtggccgagcagatcgacaccaccggcatgttcgaggccaagaac
ctcatgccgaagttcgagatccccgaagagggctacaccgagatcacctggttcaaggag
gaggtgcggcgcggcatggcccgccgctacccgggaggtgttcccgaggaccggcagaag
caggccgagtacgagctggacgtcatcatccagatggggttcccgggctacttcctcgtc
gtcgccgacttcatcatgtgggccaagaaccaaggcatcgcggtgggccccggccgtggc
tccgccgccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcacc
cacggcctgatcttcgagcggttcctgaaccccgagcgcgtctccatgcccgatgtcgac
atcgacttcgacgagcgcaggcgcgtcgaagtgatccggtacgtgaccgacaagtacggc
gacgacaaggtcgccatgatcggcacgtacggaaagatcaaggcgaagaacgccatcaag
gactccgcccgggtcctcggctacccgtacgccatgggcgaccggctcaccaaggcgatg
cccgccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccctcgcacccg
cgctacggcgaggcgggcgagatccgggcgatgtacgagaacgagccggacgtgaagaag
gtcatcgacaccgcccgcggcgtcgagggcctggtccgccagatgggcgtgcacgccgcc
ggcgtgatcatgtccagcgagccgatcgtcgaccacgctccggtctgggtgcggcacacg
gacggcgtgaccatcacacagtgggactacccgcagtgcgagtcgctcggcctgatcaag
atggacttcctcgggctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaag
gccaacaaggggatcgacctcgatctcctcggcctgccgctcgacgatcccaagacgtac
gagctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcgggcccatgcgc
tccctgctgcgcctgatgaagcccgacaacttcgaagacatctccgccgtgtccgccctg
taccggccgggcccgatgggcatgaactcccacacgaactacgccctgcgcaagaacaag
cagcaggagatcaccccgatccacccggagctggaggagccgctcagggagatcctcggc
gtcacctacggcctcatcgtctaccaggagcaggtccagaagggcgcccagatcatcgcc
ggctactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgag
gaactggcgaagaacttcgtcatcttcgaggcgggagccaaggccaagggcttcagcgac
caggcgatcaaggcgctgtgggacgtcctggtccccttcgccggctacgccttcaacaag
gcccactcggccgcgtacggcctggtctcctactggaccgcctacctcaaggccaatttc
ccggccgagtacatggcgggtctgctcacttcggtcaaggacgacaaggacaagtccgcg
atctacctgaacgagtgccgccggatgggcatcaaggtgctcctgccgaacgtgaacgag
tcggagcccaacttcgccgcccagggcgacgacgtgatcctcttcggcctcaccgcggtg
cgcaacgtcggcaccaacgtcgtggagtcgatcatcaagagcaggaaggcgaaggggaag
tactcctccttccccgacttcctggacaaggtcgaggccgtcgtctgcaacaagcgcacc
gtcgagtccctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggcctg
gtcgcccaccacgaaccgatgatcgacaacgtggtcgccgtcaagcgcaaggaggccgag
gggcagttcgacctcttcggcggaatgggtgacgagagcgcgagcgacgagcccggattc
ggcctcgacgtggagttctccgacgtcgagtgggagaagtcctacctgctcgcccaagag
cgcgagatgctcggcctctacgtctccgaccacccgctcttcggcctggagcacgtcctc
tccgacaagaccgacgccggcatctcccagctcaccggcggcgagcactccgacggcgcc
gtcgtcaccatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaac
gcctgggccatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttcccc
gcgacctaccagctcgtctccacgcagctggtcgaggacaccgtcgtcttcgtcaaggga
cgcctcgacaagcgcgaggacgtcccccggctggtcgccatggagatgatggtccccgac
ctgtcgaacgccggcaccaacgccccggtcgtcctcaccatccccaccgtcaaggtcacc
ccgccgatggtgacccggctgggcgagatcctgcgccaccaccagggcaacagcgaggtg
cggatcaagctccaggggccgcgcaccaccaccgtgctccgcctcgacaagcaccgggtc
aagcccgaccccgcgctcttcggcgacctcaaggtgctcctcggcccgtcctgcctggcc
ggatag
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