Streptomyces sp. ICC1: DRB96_42050
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Entry
DRB96_42050 CDS
T10586
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
stii Streptomyces sp. ICC1
Pathway
stii03030
DNA replication
stii03430
Mismatch repair
stii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DRB96_42050
03430 Mismatch repair
DRB96_42050
03440 Homologous recombination
DRB96_42050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stii03032
]
DRB96_42050
03400 DNA repair and recombination proteins [BR:
stii03400
]
DRB96_42050
Enzymes [BR:
stii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DRB96_42050
DNA replication proteins [BR:
stii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DRB96_42050
DNA repair and recombination proteins [BR:
stii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DRB96_42050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
HTH_29
DNA_pol3_gamma3
HTH_32
DDE_3
AAA
DNAX_ATPase_lid
HTH_28
HTH_23
RuvB_N
AAA_22
AAA_16
AAA_14
Rad17
zf-CXXC
AAA_30
AAA_5
AAA_18
AAA_19
DUF5955
AAA_28
TsaE
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWZ17564
LinkDB
All DBs
Position
8945051..8947720
Genome browser
AA seq
889 aa
AA seq
DB search
MSSLALYRRYRPESFAEVIGQEHVTAPLMQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCKDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFGPASS
RYKIYIIDEAHMVTPAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRTYLGEVCGREGAHVEDGVLPLVVRAGAGSVRDSMSVMDQLLAGAADQGVTYAMA
TSLLGYTDGTLLDAVVDAFAAGDGAAAFEIVDRVVEGGNDPRRFVADLLERLRDLVILAA
VPDAGEKGLIDAPADVVQRMQDQASVFGAAELSRAADLVNTGLTEMRGATSPRLQLELIC
ARVLLPAAFDDERSVQARLDRLERGGAAAAAAASLAAAPAPAMGYVPGPEAHAMAPAVVR
APAQPAPAPALAPEPAPMAPAALQSVEPRLHGPLVVEGGGQQHAGADQLQLQPGRGRAAH
LGEPGVDQTSAVTGKVRRVARGAGWKGVLQSAWGGGMAQPVRVRGLTEQEGQKLQNIVRR
GSTSSVRFRRAMMLLASAGGSTVPVIARLVQADEDTVRDVIHKFNEIGLACLDPRWAGGR
PRLLDRDDEDFVVQTATTRPTVLGKPFTRWSIRKLADHLRRNITRPVRIGREALRCLLAR
RGVTFQRTKTWKESPDPEFDAKLARIEYAINQRPNRTFAFDEFGPLGIRPTAGSCWAKEN
RPDRLPATYRRTHGITYFHGCYSVGDDQLWGINRRRKGIDHTWAALRSIRAARPDGAPIY
VILDNLSAHMNWRMKRWAMKNKVELCFTPTYASWANPIEAHFGPLRQFTLANSHHPNHTA
QTRALHAYLRWRNRNARHPDVLAAQRRERARIRSERGVRFGGRTRTEAA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcccttgcgctgtaccgccgctaccgccccgagtcgttcgccgaggtcatcgga
caggagcatgtcactgccccgctgatgcaggccctgcgcaacaaccgggtcaatcacgcg
tacctgttcagtgggccgcggggctgcggcaagaccaccagcgcgcgcatcctcgcccgc
tgcctgaactgtgagcagggccccacgccgaccccctgcggggagtgccagtcctgcaag
gacctcgcgcgcaacgggccgggttccatcgacgtcatcgagatcgacgcggcctcgcac
ggtggtgtcgacgacgcccgcgacctgcgcgagaaggccttcttcgggcccgcctccagc
cgctacaagatctacatcatcgatgaggcgcacatggtcaccccggcgggcttcaacgcc
ctgctgaaggtggtcgaagagcccccggagcacctcaagttcatcttcgccacgaccgag
cccgagaaggtcatcggcaccatccggtccaggacgcaccactatccgttccggctcgtg
ccccccggcaccctgcgcacctacctcggcgaggtctgcggccgcgagggcgcccacgtc
gaggacggggtgctgccgctcgtcgtgcgcgccggcgccggatccgtccgcgactcgatg
tcggtcatggaccagctgctggccggcgccgccgaccagggtgtgacgtacgccatggcc
acctcgctcctcgggtacacggacggcaccctgctggacgccgtcgtggacgccttcgcc
gccggggacggggccgccgccttcgagatcgtcgaccgggtggtggagggcggcaacgac
ccgcgccgcttcgtcgccgacctgctggagcggttgcgcgacctggtgatcctggccgcc
gtgccggacgccggggagaaggggctcatcgacgccccggccgatgtcgtgcagcggatg
caggaccaggcctccgtcttcggggccgccgagctgtcccgcgccgccgatctggtcaac
accgggctcaccgagatgcgcggcgcgacctcgccccggctgcagctggagctgatctgc
gcccgcgtgctgctgcccgccgccttcgacgacgagcggtccgtgcaggcgcggctcgac
cgactggagcgcggcggggcggcggccgcggccgcggcctccctcgccgcggccccggcc
cccgccatgggctacgtacccggcccggaggcgcacgccatggcccccgcggtcgtacgg
gctccggcgcagcccgcacccgcgcccgcactcgcacccgagcccgcgccgatggccccc
gccgcgctccagtcggtcgagccgcgcctgcacggaccgctcgtcgtcgaaggcggcggg
cagcagcacgcgggcgcagatcagctccagctgcagccggggcgaggccgcgccgcgcat
ctcggtgagcccggtgttgaccagactagtgctgtgaccgggaaggttcgccgggttgct
cgtggtgctggttggaaaggagttctccaatcagcgtggggaggcgggatggcgcaaccg
gtccgggttcgcgggctgaccgagcaggagggacagaaactccagaacatcgtccggcgg
ggaagtaccagctcagtgcggttccggcgggcgatgatgctgctggcctcggccggcggc
agcacggtcccggtcatagcccggctggtccaggcggacgaagacaccgtccgcgacgtg
atccacaagttcaacgagatcgggctcgcatgcctggaccctcgctgggcgggaggccgt
ccccgccttctcgaccgtgacgacgaggacttcgtcgtccagacggccaccacccgcccg
accgtgctgggcaagcccttcacccgctggtccatccgcaagctcgccgatcacctgcga
cgcaacatcacccggcccgtccggatcggacgggaggcactgcggtgcttactggcccgc
cgcggagtcaccttccagcgaacgaagacctggaaggagtccccggatccggaattcgac
gccaagctcgccaggatcgagtacgcgatcaaccagcggcccaaccgcaccttcgccttt
gacgagttcggcccgctcggtatccgaccgaccgccggctcttgctgggccaaggagaac
cgccccgaccgactgccggccacctaccgccgcacccacggaatcacctacttccacggc
tgctactccgtcggagacgaccagctctggggcatcaaccgcaggcgcaagggcatcgac
cacacctgggctgccttgagatcgattcgggccgcccgcccggacggcgccccgatctac
gtgatcctcgacaacctctccgcccacatgaactggcggatgaagcggtgggcgatgaag
aacaaggtcgagttgtgcttcaccccgacctacgcatcctgggccaaccccatcgaagcc
cacttcggccccctacggcagttcaccctcgccaactcacaccaccccaaccacaccgcc
cagacccgggccctgcatgcctacttacgctggcgcaaccgaaacgcccgccaccccgac
gtgctcgcagcacagcggcgcgaacgcgcccgcatccgcagcgagagaggcgtccgcttc
ggcggacggacccgtactgaagcggcctga
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