Selenomonas timonae: H1B31_01630
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Entry
H1B31_01630 CDS
T10113
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
stim Selenomonas timonae
Pathway
stim00541
Biosynthesis of various nucleotide sugars
stim01100
Metabolic pathways
stim01250
Biosynthesis of nucleotide sugars
Module
stim_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H1B31_01630 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
stim01005
]
H1B31_01630 (rfaD)
Enzymes [BR:
stim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
H1B31_01630 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
stim01005
]
Core region
H1B31_01630 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
KR
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QNH54689
UniProt:
A0A7G7VKP6
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All DBs
Position
complement(351120..352091)
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AA seq
323 aa
AA seq
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MIIVTGGAGFIGSNLVHALNARGHKDILIVDDLADGENYKNLRGLHFIDYQQKDDFLHLI
EEGDFDGTDIDAIFHEGACSDTMEYDVNYMMKVNYSYSKALLHFAMGARIPFFYASSAST
YGGGKHGFTEGGRCEDALNPYAFSKLAFDRYVRQVIPEARSPIVGLKYFNVYGPQEHHKG
KMASIFYQLYHQIMETGEARLFRGTDGLEDGEQRRDFVYVGDVVRVNLHFFENGGESGVY
NCGTGVAHSYNEAARAVIAALGKGKIVYRDFPEVLRGKYQNYTQADTTALLAAGYDGGFT
PMEEAVKDYCDFLTAGGYFSYAE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggtggtgccggctttatcggcagcaatctcgtccacgcgctgaat
gcgcgcgggcacaaggacatcctcatcgtcgacgatcttgcagacggcgagaactacaag
aacctgcgcgggctgcatttcattgactaccagcagaaggacgacttcctccacctcatc
gaggagggggacttcgacggcacggacatcgacgcaatcttccacgagggcgcgtgctcg
gatacgatggagtatgatgtcaactacatgatgaaggtgaactactcctactccaaggcg
ctcctgcactttgcgatgggggcacgcatcccgttcttctacgcctcctccgcctcgacc
tacggcggcgggaagcacggctttaccgagggcggacgctgcgaggatgcgctcaatccc
tatgcattctcgaagctcgcgttcgaccgctatgtgcggcaggtcattcccgaggcgcgc
agccccatcgtcgggctgaaatatttcaacgtctacggtccgcaggagcatcacaaggga
aagatggcatccatcttctaccagctctaccatcagatcatggagacgggcgaggcgcgt
ctcttccgcgggacggacggactcgaggacggcgagcagcggcgtgactttgtctatgtc
ggcgacgtggtgcgcgtcaacctccatttcttcgaaaatggcggcgagagcggcgtctac
aactgcggcacgggcgtcgcgcacagctacaacgaggcggcgcgtgccgtcattgctgcg
ctcggcaagggcaaaatcgtctatcgcgacttccccgaggtgctgcgcggcaagtatcag
aactacacgcaggcagatacgactgcgctccttgcggcgggctatgacggcggcttcacg
ccgatggaggaggcagtcaaggactactgcgacttcctgacggcgggcgggtacttctcc
tatgccgaataa
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