Selenomonas timonae: H1B31_04890
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Entry
H1B31_04890 CDS
T10113
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stim Selenomonas timonae
Pathway
stim03030
DNA replication
stim03410
Base excision repair
stim03420
Nucleotide excision repair
stim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H1B31_04890 (polA)
03410 Base excision repair
H1B31_04890 (polA)
03420 Nucleotide excision repair
H1B31_04890 (polA)
03440 Homologous recombination
H1B31_04890 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stim03032
]
H1B31_04890 (polA)
03400 DNA repair and recombination proteins [BR:
stim03400
]
H1B31_04890 (polA)
Enzymes [BR:
stim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H1B31_04890 (polA)
DNA replication proteins [BR:
stim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H1B31_04890 (polA)
DNA repair and recombination proteins [BR:
stim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H1B31_04890 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H1B31_04890 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH
DNA_polI_exo1
HHH_2
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
QNH55263
UniProt:
A0A7G7VMC0
LinkDB
All DBs
Position
1046842..1049475
Genome browser
AA seq
877 aa
AA seq
DB search
MSGEKFAVLDGSSLFFRAFYALQLPPNARGVHTNAVHGFAMMLVKLLKELAPTQIVIAFD
KSRTTFRTALYPEYKGTRDKTPEELIAQIPLLKELSATLGIPFLEMDDYEADDIIGTLAT
QAAEAGTETIVVTGDRDALQLIRTNLTVVLTKKGISDTRRYDTAAFEEEYGFAPIRLIDL
KGLMGDSSDNIPGVPGVGPKTATKLLLQYESIENVLDHAAEVSGKKLSASLVEYRDQALL
SKQLATIECNVPELRYEAEGFRMQPDRTALDAFCKEYELRTVGRAFSDYLSVSAPTVGVE
QSLFGEETAAAAEANLEAAAFSAADLVSLRAAEEIAVSAVFSGTAPFVQIDVLALSYGAE
RRVLRADAPEFEEARAVLAERPIVLWNAKRYAQAGLSVGANIFDLELADYLLRPEENKRD
LARAAFAHSADFPAVPEEAMQEQRAVHEALTATHLANLLRAALDGAGLMPLYREIELPLV
PVLAAMEQTGIYVNRAALERELTAANARIEALVTEIHALAGTEFNISSPKQLGEILFERL
GLAEGSKIKKTKTGYSTSAETLEELRDRHPIVDKVLTYRMWTKLRSTYLEGIGALIRPAT
GRVHTSFNQTVTATGRLSSSDPNLQNIPVRTEEGRAVRALFEPGAGYDALLSADYSQIEL
RILAHMSGDETMIDAFRTGQDIHARTASEVFGVPLAEVTGEQRRRAKAVNFGIVYGLSDY
GLSRDLGISRKEAAGYIERYFERYHGVRTFLDKIIADAHANGYVTTLYGRRRDLPAINSR
NFMQRSFAERMAMNTPIQGTAADLIKIAMIRAYDALRAAGVKSRILLQVHDELVLETVEA
EIAQVTEILRAAMSGAAELAVPLAVDVHVGKNWAEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggggagaaatttgcggtactcgacgggagcagccttttctttcgcgcgttctat
gcgctgcagctcccgccgaatgcgcgcggcgtccacacgaatgcggtgcacggctttgca
atgatgctcgtgaagctcttgaaggagctcgcaccgacgcagatcgtcatcgcgtttgac
aagagccgcacgacgtttcgtacggcgctttatccggagtacaagggcacgcgcgacaag
acgccagaggagctgatcgctcagattccgctgctgaaggagctgtccgcgacgctcggc
atccccttcctcgagatggatgactacgaggcggacgacatcatcggcacgctcgcaaca
caggcggcagaggcggggacggagaccatcgtcgtgacaggtgaccgcgatgccttgcag
ctcatccgtacgaatctcaccgtcgtcctgacgaaaaagggcatcagcgacacgcgccgc
tacgatacggcggcgttcgaggaggagtacggcttcgcgccgattcgtctcatcgacctg
aaggggctgatgggggacagctcggataacattccgggcgtacccggcgtggggccaaag
accgcaacaaagctgctcctgcaatatgagagcatcgagaacgtgctcgatcacgccgcc
gaggtcagcgggaagaaactcagtgcctcgctcgtggagtatcgggatcaggctctgctc
tcaaagcagctcgcgacaattgaatgcaatgtgccggaactccgttatgaagcggagggc
tttcgcatgcagcccgaccgcacagcgctcgatgcgttctgcaaagaatacgagctgcgg
acggtggggcgcgcgttctcggactatctctctgtgtctgcgcccaccgtcggggtggaa
cagtcgctctttggagaggagactgcagccgctgcagaggcgaacctcgaggcggcggcg
ttttccgctgccgatctcgtatcgctgcgcgcggcggaggagattgccgtcagtgcggtg
ttcagcggcacggcgccctttgtgcagatcgacgtgctcgccctttcctacggggcggag
cggcgcgtgctgcgcgcggatgcgccggagttcgaggaggcgcgcgccgtgcttgcggag
cgtcccatcgtgctctggaatgcaaagcgctatgcgcaggcggggctttccgtcggcgcg
aatatcttcgatctcgagctggcggactacctcctgcgccccgaggagaataagcgcgac
ctcgcgcgcgcggcatttgcccacagcgcggactttcctgctgtccccgaagaggcgatg
caggaacagcgcgccgtgcatgaggcactcactgccacgcatctcgccaatctcctgcgg
gcggcgctcgatggggcggggctcatgccgctctatcgggagatcgaactgccgctcgtg
cccgtactcgcggcgatggagcagacaggcatctatgtgaaccgcgcggcactcgagcgc
gagctgacggcggcgaatgcgcgtatcgaggcgctcgtcacggagattcacgcgctggcg
ggcacggagttcaacatcagctcgcccaagcagctcggtgagattctctttgagcgtctc
gggctcgcagagggcagcaagatcaagaagacgaagacgggctactcgacgagcgccgag
acgctcgaggagctgcgcgaccgccatcccatcgtggacaaggtgctgacctaccgtatg
tggacgaagctgcgctcgacctatctcgagggcatcggcgcgctcatccgtcccgcaacg
gggcgcgtgcacacaagcttcaaccagacggtgacggcgacggggcggctctcaagctcc
gacccgaatcttcagaacatccccgtgcgcacggaggaggggcgcgccgtacgtgcgctc
ttcgagccgggcgcgggctatgacgcactcctctcggcggactactcgcagatcgagctg
cgcatcctcgcgcatatgtcgggcgacgagaccatgatcgacgcattccgcacgggacag
gacatccacgcacgcacggcgtcggaggtgttcggcgtaccgctcgcggaggtgacgggg
gagcagcgccgccgcgcaaaggccgtcaacttcggcatcgtctacgggttgagcgactac
ggactctcgcgcgacctcggcatttcgcgcaaggaggcggcgggctacatcgaacgctac
ttcgagcgctatcacggcgtgcgcacattcctcgacaaaataattgcagatgcgcatgca
aacggctatgttacgacgctctatgggcggcggcgcgatctgcccgcgatcaacagccgc
aacttcatgcagcgctcctttgccgagcgcatggcgatgaatacgcccatccagggcaca
gctgccgatctcatcaagattgcgatgattcgcgcctatgacgcgctgcgtgcggcgggc
gtgaagagccgcatcctcctgcaggtgcacgacgaactcgtgcttgagacggtggaggcg
gagatcgcgcaggtcacggagatcctgcgcgcggcgatgagcggcgcggcggagctcgcc
gtgccgctcgccgtggatgtgcacgtcgggaagaactgggcggaggcgaaataa
DBGET
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