Selenomonas timonae: H1B31_05135
Help
Entry
H1B31_05135 CDS
T10113
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stim Selenomonas timonae
Pathway
stim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H1B31_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stim03021
]
H1B31_05135
03400 DNA repair and recombination proteins [BR:
stim03400
]
H1B31_05135
Enzymes [BR:
stim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H1B31_05135
Transcription machinery [BR:
stim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H1B31_05135
DNA repair and recombination proteins [BR:
stim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H1B31_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
Mg_chelatase_C
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QNH55310
UniProt:
A0A7G7VMG7
LinkDB
All DBs
Position
1096123..1097082
Genome browser
AA seq
319 aa
AA seq
DB search
MTDIEKPKIEIAEISEDGRYGRFVCEPLEPGYGTTFGNSLRRMLLSSLDGAAVTSIQIDG
VLHEFSTIPGVRDDVTSIVLALKQLCIRMQGSEPHTIRIEAEGEREVTAADIECGSDIEI
LNPDLHIATLNATGELKIEMTVERGRGYVAADKNKKADDSIGVIPIDSIFSPVQRVNYTV
EDTRVGNVTDYDRLILDVWTNGSIRPEEAVSKAAAILVMHLRLFQNMDGTVIEEEEEVPN
FPPEEVDDSAKVLEMTIDDLDLSVRSFNCLKRAGINTVADLAQKTEDDMMKVRNLGRKSL
DEVKKKLEELGLSLRQENE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacagatatcgagaaaccgaaaatcgagatcgcagagatcagcgaggacggacgctac
gggcgtttcgtctgcgagccactcgagccgggctacggcacgacgttcggcaacagtctg
cggcgtatgctgctctcctcactggatggagcggcggtcacctccatccaaatcgacggc
gtgctgcacgagttctccacaatcccgggcgtacgggatgatgtgacgagcatcgtactg
gcactcaagcagctctgcattcgcatgcaggggagcgagccgcataccatccgcatcgag
gcggagggggagcgcgaggtcactgcagccgacatcgaatgcggcagcgacatcgagatc
ctgaaccccgatcttcacattgcaacgctgaatgcgacgggcgagctcaagatcgagatg
accgtcgagcgcgggcgcggctatgtggcggcggacaagaacaagaaggcggatgacagc
atcggcgtcatccccatcgactccatcttctcccccgtccagcgcgtcaactacacggta
gaggacacgcgcgtcggcaacgtcaccgactacgaccgcctcatcctcgacgtgtggacg
aacggctccatccgtccggaggaagccgtgagcaaggcggctgccatcctcgtcatgcac
ctgcgtctgttccagaacatggacggcacggtcatcgaggaggaggaggaagtcccgaac
ttcccgcccgaagaggtcgacgacagcgccaaggtgctcgagatgaccatcgacgatctg
gatctttccgtccgttccttcaactgcctcaagcgcgccggcatcaacaccgttgccgat
ctcgcgcagaagaccgaggacgacatgatgaaggtacgcaatctcgggcgcaaatctctg
gatgaagtgaagaaaaaacttgaggagcttggactctccttgagacaggaaaacgaataa
DBGET
integrated database retrieval system
