KEGG   Selenomonas timonae: H1B31_06195
Entry
H1B31_06195       CDS       T10113                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
stim  Selenomonas timonae
Pathway
stim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H1B31_06195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stim03019]
    H1B31_06195
   03009 Ribosome biogenesis [BR:stim03009]
    H1B31_06195
Enzymes [BR:stim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     H1B31_06195
Messenger RNA biogenesis [BR:stim03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     H1B31_06195
Ribosome biogenesis [BR:stim03009]
 Prokaryotic type
  rRNA helicases
   H1B31_06195
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 SecA_DEAD
Other DBs
NCBI-ProteinID: QNH53503
UniProt: A0A7G7VHB0
LinkDB
Position
1302285..1303550
AA seq 421 aa
MTHFDQLGVSETLCALLKKQGITEPTPVQEQAIPPMRAGRDVIAQAQTGTGKTLAFLLPL
LAKIKPQGAAAQALVIAPTRELAIQIARVAEPLGAELGIGTIVIYGGADIERQKEKLRRH
PQLVIGTPGRLLDHVRRGTLALGSVNKIVLDEADEMLKMGFIEDVETLLDTVAQDYQLAL
FSATLPERIVRLTKRFMTNPAHIRIEGERTTLSNVEQVVLSVSEGTKLDRLCASINEEAP
YLAMVFCATKERTRALMMELARRGYLVDALSGDLTQTQRGFVLRQFREAKLQILCATDIA
ARGLDIEGVTHVYNYDLPPTVTDYIHRIGRTGRAGAAGKAITLVAAHQHEKLRKMEAALK
ERLRRTAVKKKPRPRPDEAGGQAAVQKGRQKRSAPKSAKPKPRSRKSGKTVTNIGRRSRK
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgacgcatttcgatcagctcggcgtgtcggagacgttgtgtgcactgctcaaaaagcag
ggcattacggagccgacaccagtgcaggaacaggcaattccgcccatgcgcgcgggacgc
gatgtcatcgcgcaggcgcagacgggcacgggcaagaccctcgcctttctcctgccgctg
cttgcaaagatcaagccgcagggagcggcagcacaggcacttgtcatcgcgcccacgcgc
gagcttgccatccagatcgcacgcgttgcggagccgctcggcgcagagcttggcattgga
acgatcgtcatctatggcggcgcggatatcgagcggcagaaggagaagctgcgccgtcat
ccgcagctcgtcatcggcacgcccggccgcctgctcgaccatgtgcggcgtgggacactc
gcgctcggcagcgtgaacaagatcgtgctcgatgaggcggatgagatgctgaagatgggc
ttcatcgaggatgttgagacgctgctcgatacggtggcgcaggactaccagctcgcgctc
ttctccgcgaccctgcccgagcggatcgtgcgccttacgaagcggttcatgacgaacccc
gcgcatatccgcattgagggagagcggacgacgctctcgaatgtcgagcaggtcgtgctc
tccgtcagcgaggggacgaagctcgatcgtctctgtgcctccatcaacgaggaggcaccc
tatctcgcgatggtcttctgcgcgacgaaggagcgtacgcgtgccctcatgatggaactc
gcacgccgcggctatctcgtcgatgcgctcagcggcgacctcacgcagacgcagcgcggg
tttgtcctgcggcagttccgcgaggcaaagctgcagatcctctgtgcgacggacatcgcc
gcgcgcgggcttgacatcgagggggtgacgcatgtctacaactacgatctgccgccgacc
gtcacggactacatccaccgcatcgggcgcacgggacgtgcaggcgcggcggggaaggcg
atcacactcgttgcggcgcatcagcacgagaagctgcgcaagatggaggccgcactcaag
gagcgtctgcggcgcacggctgtcaagaagaagccgcgtccacgtcccgacgaggcgggc
ggacaggcagccgtgcaaaaagggaggcagaaacggtctgcgccgaaaagcgcaaagcca
aagccacgcagcagaaagtcgggcaagaccgtaacaaatattgggcggcgcagtcggaaa
cgatga

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