Selenomonas timonae: H1B31_06340
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Entry
H1B31_06340 CDS
T10113
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stim Selenomonas timonae
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stim03016
]
H1B31_06340 (truB)
Enzymes [BR:
stim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H1B31_06340 (truB)
Transfer RNA biogenesis [BR:
stim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H1B31_06340 (truB)
Prokaryotic type
H1B31_06340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QNH53527
UniProt:
A0A7G7VHD4
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All DBs
Position
1334567..1335442
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AA seq
291 aa
AA seq
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MDGFINVLKPTGLSSHDVIDIVRRIFKQKRVGHAGTLDPAAAGILPLALGRAARLVEYME
GADKSYRAEIAFGYATDTGDVYGEVIESVPHPTLPTEEEMRAVLARFVGEIQQRPPAYSA
IKIGGQRAYDLARQGAEVEIEARTVTIHRLELVHVDAVRRRILIDVDCAKGTYIRSLCTD
IGTALGLPATMHFLLRTRVGGFVLADSYTLEELAEVRETALCAPDTALDLPVYELAPQRV
KAFYSGLSTSERRMELAEGCYRVYAEGVFLGIGHYDAAAQEMYPAKAFPPV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtggacggatttatcaacgtattaaaacccacagggctttcgtcgcacgatgtcatcgac
attgtgcggcgtatttttaagcagaagcgcgtggggcatgcgggcacgctcgatccagcg
gcggcgggcatcctgccccttgcactcggacgcgcggcgcgcctcgtggagtatatggag
ggggcggacaagtcctatcgcgcggagattgcgtttggatatgcgacggatacgggggat
gtgtatggcgaagtgatcgagagtgtcccgcatccgacactgcccacggaggaggagatg
cgcgccgtgcttgcgcgctttgtcggggagatccagcagcgtccgcccgcctactccgcg
atcaagatcggcggacagcgtgcctacgatcttgcgcgtcagggcgcagaggtggagatt
gaggcgcgcacggttacgattcaccgtctggaacttgtgcatgtcgatgccgtacgtcga
cgcattcttatcgatgtggactgcgcgaaggggacatatatccgctcgctttgcacggat
atcggcacggcgctcggactgcccgcgaccatgcacttcctcctgcgtacacgcgtcggc
ggctttgtgctcgcggattcgtatacgcttgaggaacttgcggaggtgcgggagacagct
ctgtgtgctcctgacactgccctcgatctgcctgtgtatgagctcgccccgcagcgcgtg
aaggcgttctacagcgggctttcgacctcggagcggcgcatggagcttgccgagggctgc
taccgtgtgtatgctgagggcgtttttctgggcatcggccattatgatgcggcggcgcag
gagatgtaccccgcaaaggcatttccgccggtgtga
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