Selenomonas timonae: H1B31_06960
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Entry
H1B31_06960 CDS
T10113
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
stim Selenomonas timonae
Pathway
stim02024
Quorum sensing
stim03060
Protein export
stim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
H1B31_06960 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H1B31_06960 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H1B31_06960 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
stim02044
]
H1B31_06960 (ffh)
Enzymes [BR:
stim01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
H1B31_06960 (ffh)
Secretion system [BR:
stim02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
H1B31_06960 (ffh)
Eukaryotic Sec-SRP protein
H1B31_06960 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
nSTAND3
Zeta_toxin
AAA_33
CbiA
APS_kinase
AAA_30
cobW
AAA_31
6PF2K
nSTAND_NTPase7
AAA_17
ParA
AAA_16
AAA_18
Halogen_Hydrol
AAA_25
ResIII
HHH_6
MobB
ArsA_ATPase
AAA_28
KTI12
NACHT
Motif
Other DBs
NCBI-ProteinID:
QNH53634
UniProt:
A0A7G7VHP1
LinkDB
All DBs
Position
1469394..1470770
Genome browser
AA seq
458 aa
AA seq
DB search
MIFENLSDRLQGIFKKLRGHGKLTEDDVSDAMREVRMALLEADVNFKVVKDFVKRVKERA
VGQEVLDTLTAAQAVIKIVDEELTALMGGTESRLSISPNPPTVIMLVGLQGSGKTTSAGK
LALMLKKQGKRPLLVADDIYRPAAIKQLEVIGEKVEVPVFSQGQEDAVAIARAAIGHSAS
HANDVVIIDTAGRLQIDETLMQELRDIKAAVKPHEILLVVDAMTGQEAVNVAQSFDESLG
LDGVIMTKLDGDARGGAALSIKAVTGCPVKFVGMGEKLEPLEVFHPDRMASRILGMGDVL
SLVEKAQENFDLENAKKMEAKLRKNDFTLDDFLDQLQQVKKLGSLSSILGMIPGMGNLKK
KLGDQEFDLDGKEMRQLEAIIRAMTPKERADITIINGSRRKRIAAGSGTRVQDVNKLLKQ
FGEMRKMMKKMKKMKGKGGMPSMPSLGGMGLPKMPFFK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatctttgagaatctgtccgatcgactgcaggggatcttcaagaagctgcgtggacat
ggcaagctgaccgaggacgatgtgagcgatgccatgcgcgaggtgcggatggcactcctc
gaagcagatgtcaacttcaaggtcgtcaaggacttcgtcaaacgcgtgaaggagcgtgcc
gtcgggcaggaggtgctcgacacactcacggcggcacaggcggtcatcaagatcgttgac
gaggaactgaccgcgctgatgggcgggacggagagccgtctgagcatcagtccgaacccg
ccgaccgtcatcatgctcgtcggcctccaaggttcgggtaagactacatcggcaggcaaa
cttgcgctcatgctcaagaagcaggggaaacgcccgttgctcgtcgcggacgacatctat
cgtcccgctgcgatcaagcagctcgaagtgatcggtgaaaaggtcgaagtgcccgtgttc
tcgcaggggcaggaggatgccgtcgccattgcacgcgccgcgatcggtcattcggcatcg
cacgcgaacgatgtcgtcatcatcgacacggcgggacgtttgcagatcgacgaaacgctc
atgcaggagctgcgcgatatcaaggcggcggtaaagccgcacgagatcctgcttgttgtg
gacgcaatgacgggacaggaagcggtcaacgtcgcgcagtcttttgacgagtcgctcggg
ctggatggcgtcatcatgacgaagctggacggcgacgcacgcggcggtgctgcgctttcg
atcaaggcagtcacgggctgccccgtgaagttcgtcggcatgggcgagaagcttgaaccg
cttgaggtgttccaccccgaccgtatggcctcgcgcatcctcggcatgggggacgtgctc
tccctcgtggagaaggcacaggagaacttcgacctcgaaaacgcgaagaagatggaggcg
aagctccgcaagaacgacttcacactcgacgacttcctggatcagttgcagcaggtgaag
aagctcggatcgctaagcagcatcctcggcatgattccggggatgggcaatctcaagaag
aagctcggcgatcaggagtttgatctcgacggcaaggagatgcgtcagcttgaggcaatc
atccgtgcgatgacaccgaaggagcgtgcggacatcacgatcattaacggcagccgccgc
aagcgcatcgctgcgggcagcggaacacgcgtgcaggatgtgaacaagctgctcaagcag
tttggcgagatgcgcaagatgatgaagaaaatgaagaagatgaagggcaagggcggaatg
ccctccatgccgtcactcggcggcatggggcttccgaagatgccattcttcaaataa
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