Selenomonas timonae: H1B31_08435
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Entry
H1B31_08435 CDS
T10113
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stim Selenomonas timonae
Pathway
stim03030
DNA replication
stim03430
Mismatch repair
stim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H1B31_08435
03430 Mismatch repair
H1B31_08435
03440 Homologous recombination
H1B31_08435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stim03032
]
H1B31_08435
03400 DNA repair and recombination proteins [BR:
stim03400
]
H1B31_08435
Enzymes [BR:
stim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H1B31_08435
DNA replication proteins [BR:
stim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H1B31_08435
DNA repair and recombination proteins [BR:
stim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H1B31_08435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QNH53887
UniProt:
A0A7G7VIE4
LinkDB
All DBs
Position
1738197..1741589
Genome browser
AA seq
1130 aa
AA seq
DB search
MAFAHLHVHTEYSLLDGASRVKELVRRTKELGMDAVAMTDHGVMYGAVRFYKEAKAQGIH
PIIGCEVYLAPRMRQERAEVDGTRYYHLILLAENETGYRNLVQLISLANIEGYYYKPRVD
KELLRKYHEGIIALSACVAGEIPQAILRGNMEQADVLVREYVEIFGRENFFLEIQDHGLP
EEKTVNHAIRDLAKKHEISLVATNDVHYVHADDSEFHDILLCVQTGRTINDPDRMKFSGP
DYYLKSEQEMAALFADYPGAIENTAKIAARCQVDFTFGELQLPFYPLPAPYESDDAYLRA
LCEERLSARYADVTDEIRERLSYELGVIRDMGYASYFLIVWDFINYARKHGVAVGPGRGS
AAGSIVAYLLEITNIDPLQYALLFERFLNPERVSMPDIDIDFDDINRGKVISYVKERYGD
DHVAQIATFGTMGAKGAIRDVGRVLEMSFSEVSAITKLVPAELNITLERALKESADFRRA
YEEDENVARVIDLARKIEGLPRNTSIHAAGVVIAKNPLSSQVPVWVSEGTLVTEFDKDDV
EALGLLKMDFLGLRTLTIIADTVRHIRTSHGIELDVDAIPLVDEKTSQMLCDGDTGAVFQ
MESAGMTNLVKDLQPKGFVDLIPTVALYRPGPLGSGMVTDFIDGLHGKKEVVYMHPLLEP
ILKETFGVVLYQEQVMQIVQVLAGFSLGQADLLRRAMGKKKHDLLMAQKEIFLQGCAKNA
IEAGLANHIFDLLTHFADYGFNKSHSAAYGLLAWQTAYLKAHYPVEFMAGVLTSIMDKTD
KIPVYIQLCRQMGIKILPPDINSSAATFGIEDGAIRFGLAAVRNVGENAIVSMERVRAEG
GQFRSLVDFCARVDMRTVNKRAIESLIKCGAFDSLGTERNQMLVALDAAMQDAARRQRDL
MSGQIGLFGEDTMEEVHQIQIPSDVPPSTARERLAWEKEATGFYITGHPLDDYSDTLGGL
LSIGEIPNTVKRDRQLVRIGGILTSTKRFTTKKGDTMLFAELEDFSGKIELTVFPRVFYA
HVSDLETDMILVVEGHVDTTGEEPKLLADQIWRMSEYRSSFYLIPSADADRRTLWTQMQE
LFAAHPGDHPVYVRSDGSWRPLHENYWIDGSAAVRQALTALMGESAVKVR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgcacatctgcatgtgcatacagagtacagtctgctcgacggtgcgagccgt
gtcaaggaacttgttcggcgcacgaaggagctcggcatggacgcagtcgctatgaccgat
cacggcgttatgtacggtgctgtccgattctataaggaagcaaaggcgcagggcatccat
cccatcattggctgcgaggtctatctcgcgccgcgtatgcggcaggagcgcgcggaggtg
gacggcacacgctactaccatttaatccttctcgccgaaaatgaaaccggctaccgcaat
ctggtgcagctcatatccctcgcaaatatcgagggatattattataagccgcgtgtggac
aaggagctgctacggaaataccacgagggaattattgcgctctctgcctgtgtggcgggg
gaaattccgcaggcaatcctgcgcgggaatatggagcaggcggacgtgctcgtccgtgaa
tatgtggagatcttcggtcgggagaacttctttctcgagatacaggatcatggtctgcct
gaggaaaagacagtcaaccatgcgattcgtgatcttgcgaaaaaacatgagattagcctt
gttgcaacaaatgatgtgcactatgtccatgcagacgatagcgaatttcatgacattctt
ctctgtgtgcagacagggagaaccatcaacgatcctgaccgcatgaagttttcgggtccc
gattactatctgaaatcggagcaggagatggcggcgctctttgcggactatccgggggcg
attgagaacacggcgaagattgctgcgcgctgtcaggtggatttcacctttggagaactg
cagctcccgttctatcccttgcccgcgccctatgagagcgacgacgcgtatcttcgtgca
ctttgtgaggagcgcctctctgcgcgttatgcggatgtcacggatgaaattcgcgagcgc
ctctcctatgagcttggcgtcattcgcgacatgggatatgcgagctacttcctcatcgtg
tgggacttcatcaactacgcgcggaagcacggcgttgccgttggtcccgggcgtggttcg
gcagcgggcagcattgtcgcctatctcctcgagatcacgaatatcgatccactgcagtat
gcgctcctctttgagcgcttcctcaatccggaacgcgtatccatgccggatattgatatc
gactttgacgatatcaaccgcgggaaggtgatttcgtatgtaaaggagcgctatggcgac
gaccatgtcgcacagattgccaccttcggtacgatgggagcgaagggcgcgattcgcgat
gtcgggcgcgtcctcgaaatgtcgttcagcgaggtctctgcgatcacgaagcttgtgccc
gcagagttgaatatcacattggagcgcgcactcaaggagtccgcggattttcgccgtgcc
tacgaggaggacgagaacgtcgctagagtgatcgacctcgcgcgcaaaattgaagggtta
ccgcgcaatacctccatccatgcggcgggcgttgtgattgcgaagaatccgttgtcgagt
caggtgcccgtctgggtctctgagggcacgcttgttacggagttcgacaaagacgatgtg
gaagcactcggtctgctcaagatggactttctggggctgcgtaccctcaccattattgca
gatacagtgcgtcatatacgtacatcgcatgggattgaactggatgttgatgcgatacca
cttgtcgatgagaaaacatcacaaatgctgtgtgatggagatacaggagctgtcttccag
atggagtcagcgggcatgacgaatctcgtcaaggacttgcagccgaagggcttcgtcgat
ctcattccgacggttgcgctctatcgtccggggccgctcggcagtgggatggtgacggac
ttcatcgacggcttgcacgggaagaaagaggtcgtctacatgcaccccctgctcgagcca
atcctcaaggagacgttcggcgtcgtactctatcaggagcaggttatgcagattgtgcag
gtgctcgcgggattcagcctcggtcaggcggatctcctgcgccgtgcgatggggaagaag
aagcacgacctcctgatggcgcagaaggagatcttcttgcagggctgcgcgaagaatgcg
attgaggcggggcttgcgaaccatatctttgacctcctgacgcattttgcggactatggg
ttcaacaagtctcacagcgctgcctacggactgcttgcatggcagacagcgtatctcaag
gcgcattaccctgtcgagttcatggcaggcgttctgacgagcattatggacaagacggac
aagattcccgtctacattcagctctgccgccagatggggattaaaattttgccgcccgac
atcaactcgagtgcggcgacattcggcatcgaggatggcgcgatccgcttcgggcttgcc
gccgtgcgcaatgtcggcgagaatgcgattgtgagcatggagcgcgtgcgcgcggagggc
ggacagttccgctcgctcgtggacttctgcgcgcgcgtcgatatgcgtacggtcaacaag
cgcgcaatcgaaagcctcatcaaatgcggcgcgtttgacagcctcggcacggagcgcaat
cagatgcttgtggcgcttgatgccgcgatgcaggatgcagcgcgccgtcagcgcgatctc
atgagcgggcagatcggcctctttggggaggacacgatggaggaggttcatcagattcag
ataccctccgatgttccgccgagcactgcgcgtgagcgcctggcatgggagaaggaggcg
acgggtttctacatcacgggacatccgctcgacgattacagcgatacgctcggcgggctc
ctctccatcggcgaaattccgaacacggtaaagagggatcgccagctcgtgcggatcggg
ggcatactgacgagtacgaagcgctttacgacgaagaagggcgacaccatgctcttcgcg
gagcttgaagatttcagcggcaagatcgaactaacggtgtttccgcgtgtcttctatgcg
cacgtgtccgatttggagacggatatgattctcgtcgtggaggggcatgtcgatacgacg
ggcgaggagccgaagctgctcgccgatcagatctggcggatgagcgaatatcgttcctcc
ttctatctgattccgtctgccgatgctgaccgccgtacgctgtggacgcagatgcaggag
ctctttgccgcacacccgggagatcatcccgtctatgtccgcagtgacgggagctggcgt
ccgctgcacgaaaattactggattgacggttcggcggcggtgcgtcaggctcttacggcg
cttatgggcgagagcgctgtcaaggtgcgatag
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