Selenomonas timonae: H1B31_08575
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Entry
H1B31_08575 CDS
T10113
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stim Selenomonas timonae
Pathway
stim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H1B31_08575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stim03400
]
H1B31_08575
Enzymes [BR:
stim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H1B31_08575
DNA repair and recombination proteins [BR:
stim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H1B31_08575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
HHH_5
Viral_helicase1
AAA_11
AAA_22
PIF1
AAA_12
HHH
NTPase_1
Helicase_RecD
HHH_2
AAA_28
AAA
HTH_IclR
AAA_5
UvrD-helicase
nSTAND3
AAA_16
bpMoxR
HHH_3
NPHP3_N
UvrD_C
T2SSE
TsaE
Mg_chelatase
TrwB_AAD_bind
AAA_24
SLFN-g3_helicase
AAA_33
SRP54
YtxK_like
MobB
Rad17
AAA_25
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QNH53913
UniProt:
A0A7G7VIH0
LinkDB
All DBs
Position
1773457..1775625
Genome browser
AA seq
722 aa
AA seq
DB search
MEFQQNLGFHSAEEELTGVVDHIIFSAGDGAFSVFRLRLAQQGKCTATVRGAAPLVGQEV
YLAGSWVTHPRFGRQFQAQRMRVSAPTSAAGIERFLASGTIDGVGPAMARRIVERFGAEA
LQIIERAPSRLKEVAGIGPKTVEKIVASYMRQSELRDIMLWLEEHGVTGAYAARIFKAYG
SLAIEVMEKAPYRLAQEIDGIGFITADTIAVAAGWEKNSSERIAAGLSYELTQISSGGHC
CIPEAMLADRAAQRLGVTRTEVMEIISREVKMSRLYAVDEMGERLIYAPQLYKAEEMTAR
LLLMLQKKADHIHVHDAESLVAAWESDHAVSLAPAQREAVIASLTHGVLVLTGGPGTGKT
TVVRSMIDILGAQGLEILLAAPTGRAAKRLAEATGCPAATVHRMLEAQGREDGEMRFGRD
AETQLEADVIIIDEVSMMDIVLMQHLLTAVLPGTHVILVGDVDQLPAVGPGSVLKDILRS
NVIPSVRLTEIFRQNNTGTIVLNAHAINAGRVPSFTEADFTFVPAVSSEDAAAQIVSLCT
RLLRAGTGLMDLQVLSPMRREACGVDLLNRSLQNALNPAGMGKEEAAGFRLGDKVMQTRN
DYMKNVFNGDIGRITRIDSEHMVVTFAENMDIPYTRDEFGALTLAYAMSVHKSQGSEYDI
VILPLVRAHHIMLQRNLLYTAVTRAKKGVIIVGDRMALFAAVSNDRTRRRYTLLAERLAE
KI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcagcaaaatcttggctttcactccgccgaggaagagctgacaggcgttgtc
gaccatatcatcttttctgcgggagacggtgcgttctccgtctttcgtctgcgtctagcg
cagcaggggaagtgtaccgcgactgtgcgcggggcagcgcccctcgtcggtcaggaggtg
tatcttgcgggcagctgggtcacgcatccgcgctttgggcgccagttccaggcgcagcga
atgcgcgtgagcgcgcccacaagtgcggcgggcatcgagcgctttctcgcgtcaggtacg
atcgacggcgttggccccgcgatggcgcggcgcattgtggagcgattcggcgcggaggca
ctgcagatcatcgagcgcgcgccgagccgcctgaaagaggtcgcgggcatcggcccgaag
accgtggagaagatcgtcgcctcctatatgcggcagtccgagctcagggacatcatgctc
tggctcgaggagcacggcgtcacgggtgcatatgctgcgcgcatcttcaaggcgtacggt
tcgcttgcaatcgaggtgatggagaaggcgccctaccgtctcgcgcaggagatcgacggc
atcggcttcatcacggcagataccatcgccgtcgcggcaggatgggagaagaactcctcc
gagcgcattgcggcagggctctcctatgagctcacgcagatctcctctggcggccactgc
tgcattccggaggccatgcttgcagatcgcgcggcgcagcggctcggtgtcacgcggact
gaggtcatggagatcatcagccgcgaggtgaagatgagccgtctctatgccgtggacgag
atgggtgagaggctgatctacgcgccgcagctctacaaggcggaggaaatgacggcacgc
cttctcctcatgctgcagaagaaggcggatcatattcatgtgcacgatgcggagtctctc
gttgccgcatgggagtcagatcatgcggtcagccttgcccccgcacagcgcgaggctgtg
atcgcttcgctcacgcacggcgtcctcgtcttgacgggcggccccggcacgggcaagacc
accgttgtgcggagcatgatcgacatcctcggcgcgcaggggcttgagatcctgctcgct
gcgccgacagggcgcgcggcaaagcgactcgcggaggcgacgggctgccctgccgcaacc
gtgcaccgcatgctcgaggcgcagggcagggaggacggcgagatgcgcttcgggcgcgac
gccgagacacagctcgaggcggatgtcatcatcatcgacgaggtgtccatgatggacatt
gtgcttatgcagcatcttctcaccgccgtgcttcccggcacacacgtcatcctcgtcggc
gacgtggatcagctgcctgccgtcggccctggctccgtgctcaaggacatcctgcgctcg
aacgtcattccgagcgtccgcctcacggagatcttccgacagaacaatacgggcaccatt
gtgctgaatgcccacgcaatcaatgcggggcgcgtgccctcgtttacggaggcggatttc
acatttgtccccgccgtatcgagtgaggatgccgccgcacagatcgtctcgctctgcacg
cgcctgctgcgcgcgggcacgggactcatggacttgcaggtgctctcgcccatgcggcgc
gaggcgtgtggggttgatctgctcaaccgcagcctacagaatgcgctcaatcctgcgggc
atgggcaaggaggaggctgccggcttccgcctcggcgacaaggtcatgcagacgcggaac
gactatatgaagaacgtattcaacggggacatcgggcgcatcacgaggattgactccgag
cacatggttgtgacctttgcggagaatatggacattccctatacgcgcgatgagttcggc
gcactcacactcgcctatgcgatgagcgttcacaagagtcagggcagcgagtacgacatc
gtcatcctgccacttgtgcgcgcgcatcacatcatgctgcagcggaacctcctctatacc
gccgtgacgcgcgcgaagaagggcgttatcatcgtcggcgaccgcatggcgctctttgcg
gcggtcagcaacgaccgcacgcgccgccgctacaccctcctcgcagagcggctggcggag
aaaatctga
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