Selenomonas timonae: H1B31_08655
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Entry
H1B31_08655 CDS
T10113
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stim Selenomonas timonae
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stim03032
]
H1B31_08655 (topA)
03400 DNA repair and recombination proteins [BR:
stim03400
]
H1B31_08655 (topA)
Enzymes [BR:
stim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H1B31_08655 (topA)
DNA replication proteins [BR:
stim03032
]
Prokaryotic type
DNA Topoisomerases
H1B31_08655 (topA)
DNA repair and recombination proteins [BR:
stim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H1B31_08655 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
QNH53927
UniProt:
A0A7G7VII4
LinkDB
All DBs
Position
1797559..1799892
Genome browser
AA seq
777 aa
AA seq
DB search
MKCTPIGALKGTDGLATLTSASKTKTSKSKGAKTTKNTSASGKKSSKKILVIVESPAKAK
TIERHLGKNYIVRASMGHLRDLPKSQFGIDVENEFAPKYINVRGKGELIRALKKEAKNAD
KIYLASDPDREGEAIAWHLAFILGVDPEKDCRIVFHEITKPAIEEAVQHPRPIHMEQVDA
QQARRMLDRIVGYKLSPLLWRKVRKGLSAGRVQSVTVRLICDREREIEAFQSEEYWTVEA
KLKKGKNAFTADVTHVRGKKLVLHSEAETKALTDDLAGQDFTVKEVKRSERRKKAAPPFT
TSSLQQDAARKLGFTSGRTMMIAQQLYEGVVLGRQGATGLITYMRTDSTRISNLAVDEAR
SYLSETYGRDYVPPRPNIYAMGKKAQDAHEGIRPTSIVRTPADVEPYLNRDQLRLYTLIW
QRFAASQMSAAVYDTIAAQIAAGDYQLRAHGSKLKFKGYTAVYVGAEIAKKEKDTLLPEL
EAGDALALSDLKPEQHFTEPPPRYNDASIVKTLEEMGIGRPSTYAPIIETIQKRGYVERR
EKQFRPTELGFIVTDMLEEYFKDIVDVKFTANLEGELDEVADGTLDKNDLLRKFYDPFDE
TLKQAEEVIGEVEIPDEVTDIPCDKCGRMMVVKQGRFGKFLACPGFPDCRNAKPLLRDTG
VACPKCGGKIVERKSRRGRAFFGCDHYPDCDYTTWDEPQQEKCKVCGSFMQKHRYRTGRS
ILYCSNEACSSRVGSPIEKELARQKERAAAKADGAPKGETKGKAVKKSAPRRKGTRA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcacgcctatcggcgcgttgaaaggaactgacggattggctacgctgacatct
gcatcgaaaacgaaaacatccaaatcgaaaggcgcaaaaactacaaaaaacacgagtgcg
tcggggaagaaatcatccaaaaaaatccttgtgatcgtcgagtctcccgcgaaggcaaag
accatcgagcgtcaccttgggaagaactacatcgtgagagcgtcgatggggcatctgcgc
gatctgccgaagagccagttcggcattgatgtcgagaatgaatttgcaccgaagtatatc
aatgtgcgcggcaagggtgagctcatccgcgcgctcaaaaaagaggcgaagaacgcggac
aagatctatctcgcaagcgatcctgaccgcgagggcgaggcaatcgcgtggcatctggcg
ttcatcctcggcgtagaccccgagaaggactgccgcattgtgttccacgagatcacaaag
cccgcgatcgaggaggcggtgcagcatccgcgcccgattcacatggagcaggtggatgcg
cagcaggcgcgccgtatgctcgaccgcattgtcggctataagctctcgccgctgctctgg
cgcaaggtacgcaagggactgtccgccgggcgcgtgcagtccgtgaccgtgcgtctcatc
tgtgatcgggagcgcgagatcgaggcgttccagtccgaggagtattggacggtcgaggca
aagctgaaaaaggggaagaatgcctttacggcggatgtcacgcatgtgcgcggaaagaag
ctcgtgctgcacagcgaggcggagacgaaggcgctgacggacgatctcgcagggcaggac
tttaccgtgaaggaggtcaagcgcagcgagcgccgcaagaaggcggcgccgccctttacg
acgagctctctgcagcaggatgccgcgcgcaagctcggctttacctcggggcgcacgatg
atgattgcccagcagctctacgagggcgttgtactcggcagacagggcgcaacgggtctc
atcacgtacatgagaacggattcgacgcgcatctcgaacctcgctgtggatgaggcgcgc
agctatctcagtgagacatacgggagggactatgttcccccgcgtccgaatatctatgcg
atgggcaaaaaggcgcaggacgcgcatgagggcatccgcccgacgagcatcgtgcgtacg
ccggcggatgtcgaaccgtatctgaaccgtgaccagctgcgcctctacacgctcatctgg
cagcgctttgccgcgagtcagatgtctgccgccgtctacgatacgattgcagcacagatt
gcggcgggggactaccagctgcgcgcacatggctcgaagctgaagttcaagggctatacc
gccgtctatgtgggcgcggagattgcaaagaaggaaaaggatacactgctgccggagctt
gaggcgggcgatgcacttgcgctctccgatctgaaacccgagcagcatttcaccgagccg
ccgccgcgctacaacgacgcgtcgattgtcaagacgctcgaggagatggggattgggcgt
ccgagcacctatgcgccgatcatcgagacgattcagaagcgcggctatgttgagcgtcgc
gagaagcagtttcgcccgacagagctcggtttcatcgtcaccgatatgctcgaggaatac
ttcaaggacattgtggacgtgaagttcacggcgaatctcgagggagagctggacgaggtt
gcggacggcacgctcgacaagaacgatctgctccgcaaattctacgatccgttcgacgaa
acgctgaagcaggcggaggaggtcatcggggaggtcgagattcccgacgaggtcacggac
attccctgcgacaaatgcggccgcatgatggtggtcaagcaggggcgcttcggcaagttc
ctcgcctgccccgggtttccggactgccgcaatgccaagccgctgctgcgcgatacgggg
gttgcgtgtccgaaatgcggcggtaagatcgtcgagcgcaagagtcggcgcgggcgtgcg
ttcttcggttgcgatcattatccggactgtgactatacaacgtgggacgaaccgcagcag
gagaaatgcaaggtctgcggctcgttcatgcagaagcatcgctaccgcacggggcgcagc
atcctctattgcagcaacgaggcgtgcagttcgcgggtcggcagcccgatcgagaaggag
ctcgcacgccagaaggagcgtgcggcagcaaaggcggacggtgcacccaagggagagacg
aagggcaaagctgtgaagaagtctgcgccacgccgcaagggtacgcgcgcatga
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