Selenomonas timonae: H1B31_08925
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Entry
H1B31_08925 CDS
T10113
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stim Selenomonas timonae
Pathway
stim03420
Nucleotide excision repair
stim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H1B31_08925 (pcrA)
03430 Mismatch repair
H1B31_08925 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stim03400
]
H1B31_08925 (pcrA)
Enzymes [BR:
stim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H1B31_08925 (pcrA)
DNA repair and recombination proteins [BR:
stim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H1B31_08925 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
H1B31_08925 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_14
CheZ
DEAD
Motif
Other DBs
NCBI-ProteinID:
QNH53974
UniProt:
A0A7G7VIN1
LinkDB
All DBs
Position
1852424..1854667
Genome browser
AA seq
747 aa
AA seq
DB search
MDLFQGLNEPQQKAVACLEGPLLIVAGAGSGKTRVLTFRIANLLEQGVPPYRILAITFTN
KAAREMRDRVDTLIGDAAHDVWLSTFHSFCARFLRMEIEQLGTYAKNFVIYDASDSKALI
RECLKELNIDEKHTAPGAVQSHISDAKNRLLDVKAFTAQATDFFAEQVAKIYELYQSKLR
ANNALDFDDLLMLTVELLTNNAGVREKYQKKFHYILVDEYQDTNGAQYAITKLLAEGHRN
ICVVGDADQSIYGWRGADMRNILNFERDYPEATVILLEQNYRSTKNILAAANAVIENNLT
RKKKELWTDNPTGDPITVYEGGTEKNEAAFIVREVERLHTMFNAKYGDIAILYRTNAQSR
NIEEAFYATGIPYSMVGAVRFYDRREIKDIIAYLRVIYNPRDTLSLLRIINVPKRGLGQT
TLGRMIEKAAEYRISLFELITDEQLLSTIPKLSAKVKFELEDFSALVFTYMGQLGTRPLH
EIVEDIIEESGYSAALEDDPKEDNRDRLENLREFISVAKNFEDGAEEGENGLEDFLAQIS
LISDVDETEQSEGSVTLMTFHAAKGLEFPTVFMAGMEEGLFPHSRTLLDDTEIEEERRTC
YVGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKTADFFADAGSSHGRS
DVWGRGSGGGRRSYLPPPPQHTAEDGSVIRPDTEAKFAAGDAVRHSKWGDGHVVAISGSG
EDAELTIAFPGEGIKKFIQKYAPILKL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggatctatttcaggggctgaacgagccacagcaaaaggccgttgcctgccttgaggga
cctctcctcatcgtggcgggcgccggctccggcaagacgcgtgtactgaccttccgcatt
gcaaacctcttggagcagggggttccgccgtaccgcattcttgccatcaccttcacgaac
aaggcggcgcgcgaaatgcgcgaccgtgtggacacgctgatcggggatgctgcgcacgat
gtctggctgagcacgttccactccttctgtgcccgtttcctacgcatggagatcgagcag
ctcggcacctatgcgaagaactttgtcatctatgatgcctcggactcaaaggcgctgatc
cgcgaatgcctgaaggaattgaatatcgacgagaagcatacggcaccgggcgccgtccag
tctcatatttcggatgcgaagaaccgcctgctcgatgtcaaggcattcacggcacaggcg
acggatttctttgcggagcaggtggcaaagatctacgagctctaccagtcgaagctgcgc
gcaaacaatgcactggatttcgacgatctgctcatgctgacggtggagctgctcacaaat
aacgctggggtacgtgaaaagtaccagaagaaatttcactacatcctcgtggacgagtac
caggacacaaacggcgcacagtatgcgattacgaagctgcttgccgagggacaccgcaat
atctgcgttgtgggtgatgcggatcagtcgatctacggctggcgcggtgcggacatgagg
aacattctgaacttcgagcgcgactatcccgaagcgacggtgatcctgctcgagcagaac
taccgctcgactaagaacatcctcgcagcggcgaatgccgtgattgagaacaatctgacg
cgcaagaagaaggagctctggacggacaatcctacgggtgatcccatcaccgtctatgag
ggcgggacggagaagaacgaggctgccttcatcgtgcgcgaagtggagcgtctgcacacg
atgttcaacgcgaaatatggcgatattgccattctctatcgtacgaacgcacagtcccgc
aacatcgaggaagcgttctacgcaacgggcattccgtattccatggtcggcgcggtgcgc
ttctatgaccgccgcgagatcaaggacatcattgcctatctgcgcgtgatctacaatcca
cgcgatacgttgagcctcctgcgcatcatcaacgtgccgaagcgtggactcggtcagaca
acccttgggcgcatgatcgagaaggcggcggaataccgtatctccctctttgaacttatc
acggacgagcagctcctcagcacgattccaaagctctctgcaaaggtaaaattcgagctt
gaggatttctccgccctcgtctttacctacatgggacagctcggcacgcggccattgcac
gaaattgtcgaggacatcattgaggagtcgggctattccgccgcactcgaggacgatccg
aaggaggacaatcgcgaccgtctcgagaatctgcgtgagtttatcagcgtggcaaagaat
ttcgaagacggcgcggaagagggagagaacgggctggaggatttcctcgcacagatctcg
ctcatctccgacgtggatgagacggagcagtcggagggcagcgtaactctcatgaccttc
catgcggcaaagggactggaattcccgaccgtcttcatggcgggcatggaggaggggctc
ttcccacattcacgcaccctgcttgacgatacggagatcgaggaggagcggcgcacctgc
tacgtcggcattacacgcgccgagcgccgtctctatctcacatacgcgcgtcagcgcaca
atctacgggcggacggaaatgtcgcgcccctcgcgcttcctcgcggagattcccgaggag
cttgtggagcataagacggcggatttctttgcggatgcggggagttcacacgggcgttcc
gatgtatggggacgcggctccggcggtggtcggcgctcctatctgcccccgccgccgcag
catacagcagaggacgggagtgtcatccgccccgacacagaggcgaaatttgcggcaggt
gacgccgtacgccacagcaaatggggagacgggcacgttgttgcaatcagcggctcgggc
gaggacgcagagctgacgattgcgttcccgggcgaaggaatcaagaaattcatacagaag
tatgcaccgattttgaagctgtga
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integrated database retrieval system
