Streptomyces tirandamycinicus: DDW44_02230
Help
Entry
DDW44_02230 CDS
T06843
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
stir
Streptomyces tirandamycinicus
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stir03051
]
DDW44_02230 (pafA)
Enzymes [BR:
stir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
DDW44_02230 (pafA)
Proteasome [BR:
stir03051
]
Prokaryotic proteasome
Bacterial regulatory particles
DDW44_02230 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
AWI27722
UniProt:
A0A2S1SMZ1
LinkDB
All DBs
Position
complement(500549..501910)
Genome browser
AA seq
453 aa
AA seq
DB search
MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVFCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFVDRRGIRTGTV
AQVLELWGRTLDAIEQEDLDSIGTEIDWVMKYKLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKKGQATRICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtcacctgacgaagtggcgcgctacctcttccgccgagtcgtgtcatgg
ggccgcagcagcaatgtcttcctgcgcaacggggcccgcctctacctcgacgtgggttcg
catccggaatacgcaactcccgaatgtgacaacgtgaccgaactggtcacccacgacaag
gccggggagcgcatcctcgaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
gggatcgcgggcgacgtctatctcttcaagaacaacaccgattcggcgggaaactcctac
ggatgccatgagaactacctcgtggcccggcacggagagttctcccggctcgcggacatc
ctcattccgttcctcgtcacccggcagctgctctgcggcgcgggaaaggtgctccagacc
cctcgtggcgccgtgttctgcgtcagccagcgcgccgagcacatctgggagggcgtcagc
tccgcgaccacccgctcccggcccatcatcaacacccgggacgagccgcacgccgacgcc
gagcgctaccgccgcctgcacgtcatcgtcggcgactccaacatgtcggagacgaccatg
ctgctcaaggtcggggccaccgacctggtgctgcgcatgatcgaggcgggcacggtcatg
cgcgacctgacgctggagaacccgatccgggccatccgcgaggtcagccacgacatcacc
ggccggcgcaaggtgcgcctggccagcggccgcgaggcctccgccctggaggtccagcgc
gagtactacgagaaggcggtggacttcgtcgaccgccggggcatccgcaccggcacggtc
gcgcaggtcctggagctgtgggggcgcaccctcgacgccatcgagcaggaggacctcgac
agcatcggcaccgagatcgactgggtgatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgacgatgtcgcacccgagggtcgcgcagatagacctcgcgtaccacgac
atccaccgcaggcgcggcctctactacctcctggagaagaagggccaggccaccaggatc
tgcaacgacctcaagatcttcgagggcaagtccgtgcccccgcagaccaccagggcgcgg
ctgcgcggcgacttcatccgccgggcgcaggagcagcggcgggacttcaccgtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcaccgtgttgtgcaaggacccgttccgc
tccgtggacgaccgggtggagaagctgatcgccggaatgtag
DBGET
integrated database retrieval system
