Streptomyces tirandamycinicus: DDW44_03875
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Entry
DDW44_03875 CDS
T06843
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
stir
Streptomyces tirandamycinicus
Pathway
stir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DDW44_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stir03400
]
DDW44_03875
Enzymes [BR:
stir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
DDW44_03875
DNA repair and recombination proteins [BR:
stir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DDW44_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF7387
Motif
Other DBs
NCBI-ProteinID:
AWI28022
UniProt:
A0A2S1SNR0
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All DBs
Position
894890..895753
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AA seq
287 aa
AA seq
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MSNPVGAHVPVAGGLARTGLAYAREIEAEAVQVFVANPRGWATPAGDPAQDELFRAGTAA
AAVPVYVHAPYLINFGSHNAVTAERSVESLRHSLRRGREIGAAGVVVHTGSATGGRTRET
ALAQVRELVLPLLDELTHDDDPFLLLEPTAGQGFSLCSLAGELGPYVEALDAHPRLGVCL
DTCHAFAAGHDLAAEGGAGRMLDLLEAAIGPGRLRLIHANDSKDVVGARRDRHENIGAGH
IGEEAFRELMRHPAARGVPLIIETPGGRHGKETYAADVALLKKLRDG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacccggtcggcgcccatgtgcccgtggcaggcggtctggccaggaccggtctg
gcgtacgcccgggagatcgaggccgaggcggtacaggtcttcgtcgccaatccgcggggc
tgggcgaccccggcgggtgaccccgcgcaggacgagctgttccgcgccgggaccgcggcc
gccgccgtcccggtgtacgtgcacgccccgtatctgatcaacttcggctcccacaacgcg
gtcaccgccgagcggtccgtggagtcgctccgccactcgctgcgccgcggccgggagatc
ggcgcggcgggggtggtggtgcacaccggctcggcgaccgggggccggacgcgcgagacg
gccctcgcccaggtgcgggagctggtgctgcccctgctggacgagctgacgcacgacgac
gacccgttcctgctgctggagccgacggccgggcagggcttctcgctctgctcactggcc
ggggagctcggtccgtacgtcgaggccctggacgcccacccgcggctgggcgtctgcctg
gacacctgccacgcgttcgcggccggtcacgacctcgccgcggagggcggagccgggcgg
atgctcgacctcctcgaggccgcgatcggccctggccggctgcgactgatccacgccaac
gactccaaggacgtcgtgggggcgcgcagggaccgccacgagaacatcggtgccggccac
atcggcgaggaggcgttccgcgagctgatgcggcatccggcggcgcggggtgtgccgctg
atcatcgagacgccgggcggccggcacggcaaggagacgtacgcggccgatgtggcgctg
ctgaagaagctccgcgacggctga
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