Streptomyces tirandamycinicus: DDW44_11360
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Entry
DDW44_11360 CDS
T06843
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
stir
Streptomyces tirandamycinicus
Pathway
stir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDW44_11360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stir03400
]
DDW44_11360
Enzymes [BR:
stir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDW44_11360
DNA repair and recombination proteins [BR:
stir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DDW44_11360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
C1_1
DUF1344
CaATP_NAI
Motif
Other DBs
NCBI-ProteinID:
AWI29319
UniProt:
A0A2S1SSD0
LinkDB
All DBs
Position
complement(2580575..2582740)
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AA seq
721 aa
AA seq
DB search
MSSADEASERPGDGSPEQLALIRETVRKAAKPRAKPRTWRGAALAGERPVARVVVNKGVL
HLDQYFDYAVPEELDEDAQPGVRVRVRFGAGSHQVREGRREGGRLIDGFIVERRADSDYS
GPLAALAGVVSPEPVLSPGLLGLARAVADRYAGSLADVLQLAVPPRSARAESRPSPPPLP
SPAAPEPGTWTRYEQGPAFLNALAGGGVPRAVWTALPGPQWAGELAVAVAATLASGRGAL
VVLPDGRAVARVDAALTELLGAGRHAVLTAEAGPEKRYGQWLSVRRGSVRAVVGTRAAMF
APVRDLGLVAIWDDGDSSHSEQHAPLPHAREVLLLRAAHEHCGFLLGGVSCTVEAAQLVE
TGWARPLAADRGQVRRAAPLIRTVGDGDLARDEAARAARLPTLAWQTVREGLRSGPVLVQ
VPRRGYVPKLACERCRAPARCGHCAGPLEAPREQDLRCGWCGRDAAGWHCAECGGARLRA
RIVGARRTAEELGRAFPAVPVRTSGRDHVLDSVPGRPALVVSTPGAEPVAEGGYAAALLL
DGWAMLGRPDLRAGEEALRRWTGAAALVRSQTEGGTVVVVAEPTLRPVQALVRWDPAGHA
RRELAERAELGFPPVSRMASVTGRAEAVADFLAGVSLPGDAEVLGPVPLPPPPPGRPRRP
GDPPQAPRGGRGPGEQWERALLRVPPGSGAALAAALKSAQAARLARGGEPVRIRVDPPDI
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgccgacgaagcctccgagcggcccggggacggttcgccggagcagcttgcg
ctgatccgggagaccgtgcgcaaggccgcgaagccgcgggccaagccgcgcacctggcgg
ggagcggccctcgccggggaacggccggtggcccgggtggtggtgaacaagggcgtactc
cacctcgaccagtacttcgactacgcggtgcccgaggaactggacgaggacgcgcagccc
ggggtgcgggtccgggtgcgcttcggcgccgggtcccaccaggtgcgggagggccgccgc
gaaggcggccggctgatcgacgggttcatcgtcgagcggcgggccgactccgactactcg
ggcccgctcgccgccctcgcgggcgtggtctcgcccgagcccgtgctcagccccggactg
ctcggtctggccagagcggtcgccgaccggtacgcgggcagtctcgccgacgtgctccag
ctcgccgtgccgcccaggagcgcacgcgccgagtcccggccgtcgccccctccgctgccg
tccccggcggcgccggagccgggcacctggacccggtacgagcagggtcccgcctttctg
aacgcgctggcgggcgggggcgtgccgagggccgtgtggacggcactgccgggaccgcag
tgggccggtgagctggcggtggccgtcgcggcgaccctcgcgtccggccggggtgcgctg
gtggtcctcccggacgggcgggccgtggcccgggtggacgcggccctgaccgaactgctc
ggcgccggacgccatgccgtcctcaccgcggaggccggccccgagaagcggtacgggcag
tggctctccgtgcggcgcggctcggtacgggcggtggtcgggacgcgcgcggcgatgttc
gcgccggtccgggacctcgggctggtcgcgatatgggacgacggggactccagccacagc
gagcagcacgcgccgctgccgcacgcccgggaggtgctgctgctgcgtgcggcgcacgag
cactgcggattcctgctgggcggcgtgagctgcacggtggaggccgcccagctcgtcgag
accggctgggcgcggccgctggccgcggaccgtggacaggtgcgccgtgccgcgccgctg
atccgcacggtcggcgacggcgatctcgcccgcgacgaggcggcacgggccgcccggctg
ccgacgctggcgtggcagaccgtacgggaggggctgcgctcgggtccggtgctggtccag
gtgccccgccgcggctacgtgccgaagctggcctgcgagcgctgccgggcgcccgcgcgc
tgcggccactgcgcgggaccgctggaggccccgcgggagcaggacctccggtgcggctgg
tgcggacgggacgccgccggctggcactgcgccgagtgcggcggagcgcggctgcgcgcc
cggatcgtgggggcccggcgcacggcggaggaactggggcgggcgtttcccgcggtgccc
gtgcggacgtcggggcgggaccacgtgctggactccgtacccggccgacccgcgctggtg
gtcagcacgccgggcgccgagccggtggccgagggcggctacgcggcggcgctgctgctc
gacggctgggccatgctcgggcggcccgacctgcgggcgggggaggaggcgctccggcgc
tggacgggggccgccgcactggtgcggagccagacggagggcggcacggtcgtggtggtc
gccgagcccacgctgcgtccggtccaggccctggtgcggtgggatccggccggtcatgcc
cggcgcgagctggcggagcgcgccgagctgggattcccgccggtgtcgcggatggcctcg
gtgaccgggcgggcggaggcggtggcggacttcctggccggagtgtcccttcccggcgac
gccgaggtgctcgggccggtgcccctcccgccgccccctccggggcggccgcgccgcccc
ggcgaccctccgcaggcccctcgggggggacgcgggccgggggagcagtgggagcgcgcc
ctgctgcgcgtaccgcccggcagcggcgccgcactcgccgccgcgctgaagtcggcccag
gccgcgaggctcgcacggggcggcgagccggtacggatccgggtggacccgccggacatc
ggctga
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