Streptomyces tirandamycinicus: DDW44_15110
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Entry
DDW44_15110 CDS
T06843
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
stir
Streptomyces tirandamycinicus
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stir03032
]
DDW44_15110 (gyrB)
03400 DNA repair and recombination proteins [BR:
stir03400
]
DDW44_15110 (gyrB)
Enzymes [BR:
stir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DDW44_15110 (gyrB)
DNA replication proteins [BR:
stir03032
]
Prokaryotic type
DNA Topoisomerases
DDW44_15110 (gyrB)
DNA repair and recombination proteins [BR:
stir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DDW44_15110 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AWI29950
UniProt:
A0A2S1SU78
LinkDB
All DBs
Position
3412280..3414355
Genome browser
AA seq
691 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTAADGTGQGLGPSSYDASAITVLEGLDAVRKRPGMYIGS
TGERGLHHLVQEVVDNSVDEALAGHADTIDVTILADGGVRVVDNGRGIPVDIHPVEKKPA
VEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVSVEIKRDGYRWTQDYKMGVP
TAPLAKHEPVEDSGTTVTFWADPDIFETTEYSFETLSRRFQEMAFLNKGLTLTLTDERES
AKATVGADDPDAEAADEPKARTVEYHYEGGIVDFVTYLNSRKGELIHPTVIDIEAEDKER
LLSVEVAMQWNSQYSEGVYSFANTIHTHEGGTHEEGFRAALTGLVNRYARDRKLLREKDD
NLTGEDIREGLTAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKVVNEHLTDWFDRNPNEA
ADIVRKGIQAATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSA
GGSAKSGRNPMYQAILPIRGKILNVEKARVDKILQNTEVQALISAFGTGIHEDFDIEKLR
YHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDDFEYAYS
DRERDALVELGKQQGKRIKEDSIQRFKGLGEMNAEELRVTTMDVEHRVLGQVTLDDAAQA
DDLFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacattcct
tccactgctgccgacgggaccggccagggcctggggccctcgtcgtacgacgccagcgcg
atcaccgtcctcgagggtctggacgcggtccgcaagcgccccggcatgtacatcgggtcg
accggtgagcgtggtcttcatcacctcgtccaggaggtcgtcgacaactccgtcgacgag
gccctggccgggcacgcggacacgatcgacgtgacgatcctcgccgacggcggggtcagg
gtcgtggacaacggccgcggcatccccgtcgacatccacccggtggagaagaagccggcc
gtcgaggtcgtcctcacggtcctgcacgccggcggcaagttcgggggcggcggctacgcc
gtgtcgggcggtctgcacggcgtcggcgtgagcgtcgtcaacgcgctctccaccaaggtc
tcggtggagatcaagcgcgacggctaccgctggacgcaggactacaagatgggggtgccc
accgccccgctggcgaagcacgagccggtcgaggactcgggtaccacggtcacgttctgg
gccgacccggacatcttcgagacgaccgagtactccttcgagacgctctcgcgccgcttc
caggagatggccttcctcaacaagggcctgaccctgacgctgacggacgagcgggagtcg
gcgaaggcgaccgtcggcgcggacgacccggacgcggaggcggcggacgagccgaaggcg
cgcacggtcgagtaccactacgagggcggcatcgtcgacttcgtgacgtacctgaactcc
cgcaagggcgaactgatccaccccacggtcatcgacatcgaggccgaggacaaggagcgg
ctgctctcggtcgaggtggcgatgcagtggaactcgcagtacagcgagggcgtctactcc
ttcgccaacacgatccacacccacgagggcggtacccacgaggagggcttccgcgccgcg
ctcacgggcctggtcaaccgctatgcgcgggaccggaagctgctgcgcgagaaggacgac
aacctcaccggtgaggacatccgcgagggtctgaccgcgatcatctcggtcaagctcggc
gagccccagttcgagggccagaccaagaccaagctgggcaacacggaggcgaagaccttc
gtccagaaggtggtcaacgagcacctcaccgactggttcgaccgcaaccccaacgaggcc
gcggacatcgtccgcaagggcatccaggccgccacggcccgtgtcgccgcccgcaaggcc
cgcgacctcacgcgccgcaagggcctgctggagagcgcctcgctgccgggcaagctgtcc
gactgccagtcgaacgacccgaccaagtgcgagatcttcatcgtcgagggagactccgcc
ggcggctcggccaagtccggccgcaacccgatgtaccaggcgatcctgccgatccggggc
aagatcctgaacgtcgagaaggcgcgggtcgacaagatcctccagaacaccgaggtccag
gcgctgatctccgccttcggcaccggtatccacgaggacttcgacatcgagaagctccgc
tatcacaagatcatcctgatggcggacgccgacgtggacggccagcacatcaacaccctg
ctgctgaccttcctcttccgcttcatgcggccgctggtcgaggcgggccatgtgttcctc
tcccgtccgccgctctacaagatcaagtggggccgcgacgacttcgagtacgcgtactcc
gaccgcgagcgggacgccctcgtcgagctcggcaagcagcagggcaagcggatcaaggaa
gactcgatccagcgcttcaagggtctcggcgagatgaacgccgaggagctgcgcgtcacc
acgatggacgtcgagcaccgcgtcctcggccaggtcacgctggacgacgccgcgcaggcg
gacgacctgttctcggtgctgatgggcgaggacgtcgaggcacggcgctccttcatccag
cgcaacgccaaggacgtccgcttcctcgacatctga
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