Streptomyces tirandamycinicus: DDW44_20220
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Entry
DDW44_20220 CDS
T06843
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stir
Streptomyces tirandamycinicus
Pathway
stir03420
Nucleotide excision repair
stir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DDW44_20220
03430 Mismatch repair
DDW44_20220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stir03400
]
DDW44_20220
Enzymes [BR:
stir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDW44_20220
DNA repair and recombination proteins [BR:
stir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DDW44_20220
MMR (mismatch excision repair)
Other MMR factors
DDW44_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_ribbon_TiaS
C1_1
Motif
Other DBs
NCBI-ProteinID:
AWI30843
UniProt:
A0A2S1SWQ5
LinkDB
All DBs
Position
4555585..4557759
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AA seq
724 aa
AA seq
DB search
MTAATHSSLFPPVPESADAVLDGLDPEQRAVATALTGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPASVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQYFWPKAVGGE
LPRLLERKIQLVAEAAARCRVRLDRNELRDVTSEIEWAKVTQTVPADYPAAVAKSLRDAP
RDPAEIGQIYALYEQLKRDRSVIDFEDVLLLTVGILQDRHDIADQIRRQYQHFVVDEYQD
VSPLQQRLLELWLGDRESLCVVGDASQTIYSFTGATPDHLLNFRTRHPQATVVKLVRDYR
STPQVVHLANGLLGQARGRAAEHRLELVSQRDPGPEPSYTEYADEPAEAEGTARRIRDLI
AAGVPAGEIAVLYRVNAQSEVYEQALADAGVPYQLRGAERFFERAEVREAGVALRGAARA
GGNDALLDDAEDLPSQVRAVLSTKGWTTEPPTGSGAVRDRWESLAALVRLAEDFARGRPG
AGLADLVAELDERAAAQHAPTVQGVTLASLHSAKGLEWDAVFLVGLTEGMMPITYAKTDE
QVEEERRLLYVGVTRARLHLSLSWALSRSPGGRASRRPTRFLNGLRPGSAAPGPRAAGGA
GGVERGDTGRRKRRGPVLCRVCGKTLTDAGEMKLMRCEDCPSDMDEALYERLREWRSEQA
RELGQPAYCVFTDKTLMAIAEAVPGSERELAAISGVGGRKLDRFGAVVLAICAGQEAGGG
EEGD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactcctctctcttccctccggtccccgagtccgcggacgctgtg
ctcgacgggctcgaccccgagcagcgggcggtcgcgacggccctgaccggcccggtgtgc
gtcctggccggcgccggcacgggcaagacgcgggcgatcacccatcgcatcgcctacggg
gtgcgggccgggatactccagcctgcgagtgtgctggccgtcacgttcaccaaccgtgcg
gcgggggagatgcgtggccggctgcggcagctcggtgcggggggcgtgcaggcccgcacc
ttccactcggccgccctgcggcagctccagtacttctggccgaaagccgtcggcggggag
ttgccgaggctgctggagcgcaagatccagctcgtcgccgaggcggccgcccgctgccgt
gtccggctcgaccgcaacgagctgagggacgtgaccagcgagatcgagtgggccaaggtc
acccagaccgtccccgccgactacccggccgccgtcgccaagtccctcagggacgctccg
cgcgaccccgcggagatcggccagatctatgcgctgtacgagcagctgaagcgcgatcga
tcggtgatcgacttcgaggacgtcctgctgctcaccgtaggcatcctccaggaccgccac
gacatcgccgaccagatccgccgtcagtaccagcacttcgtggtggacgagtaccaggac
gtgtcgccgctccagcagcggctgctggagctgtggctcggcgaccgggagagcctgtgc
gtcgtcggcgacgccagccagacgatctactccttcaccggtgccactcccgaccatctg
ctgaacttccgcacccgtcacccccaggcgacggtggtgaaactcgtgcgcgactaccgg
tcgaccccccaggtggtccatctggccaacggtctgctggggcaggcacgcggccgcgcc
gcggagcaccgcctggagctggtctcgcagcgcgacccgggcccggagccgtcctacacg
gagtacgcggacgagcccgccgaggccgagggcaccgcccgccggatccgcgacctgatc
gccgcgggcgtcccggccggtgagatcgccgtgctgtaccgggtcaacgcccagtccgag
gtctacgagcaggccctcgccgacgcgggtgtgccctaccagctgcgcggcgcggagcgc
ttcttcgagcgagccgaggtccgggaggccggcgtcgcgcttcggggagcggcccgcgcc
gggggcaacgacgccctgctggacgacgcggaggatctgccctcgcaggtccgggccgta
ctgtccaccaagggctggaccaccgagccgcccaccggctcgggtgcggtgcgcgaccgc
tgggagtcgctggccgccctcgtccggctggccgaggacttcgcgcgcggcaggcccggg
gccggcctcgccgacctggtcgccgagctcgacgagcgcgccgcggcccagcacgccccg
acggtccagggcgtcaccctggcctcactccactcggccaagggactggagtgggacgcc
gtgttcctggtcgggctcaccgaggggatgatgccgatcacctacgccaagaccgacgaa
caggtcgaggaggagcgccggctcctgtacgtcggcgtcacccgcgcccggctccatctt
tcgctctcctgggcgctctcccgttcgcccggcggacgtgcctcccgccgccccacccgc
ttcctgaacgggctcaggcccggctccgcggccccgggcccccgagcggccggcggcgcc
ggaggcgtcgagcgcggcgacaccggccggcggaagcggcgcggcccggtgctgtgccgg
gtgtgcggaaagacgctcaccgacgccggcgagatgaagctgatgcgctgtgaggactgc
ccctcggacatggacgaggcgctgtacgagcggcttcgcgagtggcgctcggagcaagcc
agggagctgggccagccggcgtactgcgtcttcaccgacaagaccctcatggcgatcgcc
gaggccgtgcccggcagcgagcgggagcttgccgcgatctccggggtggggggacgcaag
ctggaccgtttcggcgccgtcgtcctggccatctgcgcaggccaggaggccgggggcggc
gaggagggcgactga
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