Streptomyces tirandamycinicus: DDW44_20510
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Entry
DDW44_20510 CDS
T06843
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stir
Streptomyces tirandamycinicus
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stir03021
]
DDW44_20510
Transcription machinery [BR:
stir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DDW44_20510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
PF0610-like_N
DUF7343
NirdL-like_HTH
HTH_Crp_2
HTH_24
DUF722
Sigma70_ECF
MarR_2
HTH_3
MarR
DUF8073_C
HTH_AraC
IF2_N
HTH_ParB
GerE
Motif
Other DBs
NCBI-ProteinID:
AWI30890
UniProt:
A0A2S1SWX1
LinkDB
All DBs
Position
complement(4615635..4616654)
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AA seq
339 aa
AA seq
DB search
MRDGDGPVRDEERISGTRNGGPTAPAEPAGAPAGIPEQQARPHPVDERDGLPAAAEQKQA
GGTSRAKHWQRAAMSEHEHDLKEHGHHAPNDRSEARSMFIALRGLPEGSPERAELRNKLV
RMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIK
RHFRDKGWAVRVPRRLQELRLALTTATAELSQQYGRSPTVHELAGRLGISEEEVLEGLES
ANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRF
FGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgagggacggggacggtccggtgcgcgacgaggagcggatttccggaacgcggaacggc
gggcccacggccccggcggagccggccggcgcgccggcgggcatcccggagcagcaggcc
aggccgcacccggtggacgagcgtgacggcctcccggccgcggcggagcagaagcaggct
gggggtacctcccgggcgaagcactggcagagggcggccatgagcgagcacgagcacgac
ctcaaggaacacgggcaccacgctccgaacgaccggagcgaggcgcggtcgatgttcatc
gcgctgcgcgggctcccggagggctccccggagcgcgccgaactccggaacaagctggtg
cggatgcacctgcccctggtggagcacctggcccgccgcttccgcaaccgcggcgagccg
ctcgacgacctcacccaggtcgcgaccatcgggctgatcaagtccgtggaccggttcgac
cccgaccggggtgtcgagttctcgacctacgcgacgccgaccgtcgtgggggagatcaag
cggcacttccgcgacaagggctgggcggtgcgggtcccgcggcggctgcaggagctgcgg
ctggcgctgaccacggcgaccgcggagctgtcccagcagtacggccgctcccccacggtc
cacgagctcgccgggcgtctcggcatctccgaggaggaggtcctggagggcctggagtcc
gcgaacgcgtactcgacgctctcgctcgacgtccccgacaccgacgacgagtccccggcg
gtcgcggacaccctgggcgccgaggacgaggcactggagggcgtcgagtaccgcgagtcg
ctgaagccgctgctggaggacctgccacccagggagaagcggattctcctcctccggttc
ttcggcaacatgacgcagtcgcagatcgcgcaggaggtcgggatctcccagatgcacgtc
tcccgcctcctggcacgcacgctcgcacaactccgcgagaagctcctggtcgaggagtga
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