Streptomyces tirandamycinicus: DDW44_24440
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Entry
DDW44_24440 CDS
T06843
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stir
Streptomyces tirandamycinicus
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stir03016
]
DDW44_24440
Enzymes [BR:
stir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DDW44_24440
Transfer RNA biogenesis [BR:
stir03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DDW44_24440
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWI31572
UniProt:
A0A2S1SYU0
LinkDB
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Position
complement(5598772..5600055)
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AA seq
427 aa
AA seq
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MTDAQETAAEPDLRTTGGGPPDDGVTADGVPIPLLEPREGIPPVVSTPEGLESVVAAFAA
GSGPVAVDAERASGYRYGQRAYLVQLRRQGAGTALVDPVGCPDLSALGDALTGSEWILHA
ATQDLPCLREIGMLPTRLFDTELAGRLAGFPRVGLGAMVESVLGYALEKGHSAVDWSTRP
LPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWARQEFDAIASAPPAPPRKDPWRRTS
GMHKVRRRRQMAVVRELWTARDKVAQRRDVSPGKVLGDAAIIEAALALPLTVQALTALPG
FGHRMGRRQLEQWQAAVDRALALPEGELPQPGQPVTGPPPPRSWADKDPAAAARLSAARA
AVSVLAEQLNLPQENLITPDTVRRLCWEPPAEPGPEAVVSALTALGARPWQVEQVTPLLT
RALQATA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagagccggacctgcgcaccaccgggggcggcccc
ccggacgacggcgtcaccgccgacggggtgccgatccccctgctggagccgcgggagggc
atcccaccggtggtctccaccccggagggactggagtccgtcgtcgccgcgttcgccgcc
ggctccggccccgtcgccgtcgacgccgaacgcgcgtccggctaccggtacggacagcgc
gcgtacctcgtccagctgcgccgccagggcgcgggcacggcgctcgtcgacccggtcggg
tgccccgacctctccgccctcggcgacgccctcaccggcagcgagtggatcctgcacgcc
gccacccaggacctcccgtgcctgcgtgaaataggcatgctgccgacccggctcttcgac
accgagctcgccgggcggctcgcgggcttcccccgggtgggcctcggcgccatggtcgag
tcggtgctcggctacgccctggagaaggggcactcggcggtggactggtccacccgcccc
ctcccggagccctggctgcggtacgcggcgctcgacgtcgagctgctcgtcgacctccgg
gacgcactggagaaggagctggaccggcaggggaagctggagtgggcgcggcaggagttc
gacgccatcgcctcggcgccgcccgctcccccgcgcaaggacccctggcggcgcacctcg
ggcatgcacaaggtgcgacgccgccgtcagatggccgtcgtacgggagctgtggacggcc
cgcgacaaggtcgcccagcgccgcgacgtctcccccggcaaggtgctcggcgacgcggcg
atcatcgaggcggcgctggcgctcccgctgaccgtgcaggcgctgacggcactgcccggc
ttcgggcaccgcatgggccggcgacagctggagcagtggcaggcggcggtggaccgcgcg
ctggcgctgccggagggggagctgccgcagccgggccaaccggtgaccggaccgcctccg
ccgcgctcctgggcggacaaggacccggccgcggccgcgcggctgtccgcggcgcgggcg
gcggtgtccgtgctggcggagcagctgaacctgccccaggagaacctgatcacgccggac
accgtgcggcgcctgtgctgggagccgccggcggaaccgggcccggaggcggtcgtgtcc
gcgctgaccgcactgggggcgcggccctggcaggtcgaacaggtgacaccactgctgacg
agggcgctgcaggcgactgcgtga
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