Streptomyces tirandamycinicus: DDW44_26270
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Entry
DDW44_26270 CDS
T06843
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
stir
Streptomyces tirandamycinicus
Pathway
stir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DDW44_26270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stir03000
]
DDW44_26270
03400 DNA repair and recombination proteins [BR:
stir03400
]
DDW44_26270
Enzymes [BR:
stir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DDW44_26270
Transcription factors [BR:
stir03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DDW44_26270
DNA repair and recombination proteins [BR:
stir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DDW44_26270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AWI31903
UniProt:
A0A2S1SZR1
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All DBs
Position
6020545..6022050
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AA seq
501 aa
AA seq
DB search
MPSDVHPSMHTDTERCVRAVRSRDARFDGWFFTAVLTTRIYCRPSCPAVPPRAENMTFYP
SAAACQQAGFRACKRCRPDTSPGSPEWNARADAVARAMRLIQDGVVDREGVTGLAARLGY
STRQIERQLLAEVGAGPLALARAQRAQTARILAETTALPMADVAFAAGFSSIRTFNDTVR
EVFALAPSELRNRAATRRGGAPLPAAPGVITLRLPFRTPLNPDNLFGHLAATAVPGVEEW
RDGAYRRTLTLPNGPGIVSLTPRPDHIGCRLSLTDHRDLTFAISVCRRMLDLDADPVAVD
DQLRTDPLLAPLVDKAPGRRVPRTADAAEFAVRAVLGQQVSTAAARTHAARLVTAHGTPV
QDPEGGLTHLFPEPGALAAVDPERLAFPRSRRTALTTLFGALADGTLRLGPGSDWDEARA
RLSELPGFGPWTVEVIAMRALGDPDAFLPTDLGVRHAAAGLGLPSTPAALTARAAAWRPW
RAYAVQYLWATGDHPINRLPV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgacgtgcacccgtccatgcacaccgacaccgagcgctgcgtacgggccgta
cggtccagggacgcgcggttcgacgggtggttcttcaccgccgtgctgacgacccgcatc
tactgccggcccagctgccccgccgttcccccgcgcgccgagaacatgaccttctacccc
agtgcggcggcctgccagcaggccgggttccgggcctgcaagcggtgccgcccggacacc
agccccggatcgccggagtggaacgcccgcgccgacgccgtcgcccgcgcgatgcgcctg
atccaggacggggtcgtcgaccgggagggcgtgaccggcctcgcggcccgcctggggtac
tcgacccggcagatcgagcggcagctcctcgccgaggtcggcgcgggaccgctcgcactg
gcccgggcacagcgcgcgcagaccgcccggatcctcgcggagacgaccgcgctgcccatg
gccgacgtggcgttcgccgcgggcttctcctccatccggaccttcaacgacaccgtccgc
gaggtgttcgcgctggccccgagcgagctgcggaaccgcgccgcgacccggcgcggcgga
gcgccgctcccggcggcaccgggcgtcatcacgctgcgcctgccgttccgcacgccgctg
aaccccgacaacctcttcgggcatctggccgcgaccgccgtacccggggtggaggagtgg
cgggacggcgcgtaccgccgcacactcacgctgccgaacggccccggcatcgtgtccctg
accccgcggccggaccacatcggatgccggctgtccctcaccgaccaccgcgacctcacc
ttcgccatcagcgtctgccggcggatgctcgacctggacgccgaccccgtcgccgtggac
gaccagctccgcaccgacccgctgctcgcgccgctcgtcgacaaggcgccggggcggcgc
gtgccgcgcaccgccgacgccgcggagttcgcggtacgggccgtcctcggccagcaggtc
tccaccgcggccgcccgcacccacgccgcccggctggtcaccgcccacggcacgcccgtg
caggaccccgagggcggcctcacccacctcttccccgaacccggggcgctggccgccgtc
gacccggagcgcctcgcgttcccgcgcagccggcggaccgccctcaccacactcttcggg
gcgctcgccgacggcacgctccgcctcggtcccggcagcgactgggacgaggcccgcgcc
cggctctccgagctgcccggcttcggcccctggaccgtggaggtcatcgccatgcgggca
ctcggcgaccccgacgcgttcctgcccacagacctcggcgtccggcacgccgccgcaggc
ctcggcctgccgtcgacgcccgccgcactcaccgcccgcgccgccgcctggcgcccctgg
cgcgcctacgccgtccagtacctctgggccaccggcgaccacccgatcaaccgactccct
gtctga
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