Streptomyces tirandamycinicus: DDW44_27860
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Entry
DDW44_27860 CDS
T06843
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
stir
Streptomyces tirandamycinicus
Pathway
stir00523
Polyketide sugar unit biosynthesis
stir01100
Metabolic pathways
stir01110
Biosynthesis of secondary metabolites
stir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DDW44_27860
Enzymes [BR:
stir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
DDW44_27860
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AWI32191
UniProt:
A0A2S1T0P3
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Position
complement(6396004..6397305)
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AA seq
433 aa
AA seq
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MTDTKALVLELARKYHKERETRAFEPGVTPILSSGAVLDEEDRHALVEAALEMRIAAGVR
TRKFESEFARYFRLRKAHMVNSGSSANLLAVSALTSPKLKDLRLRPGDEAITVGAGFPTT
INPLVQNGLTPVFVDVELGTYNASLAQIEAAISPRTRLIMIAHALGNPFPVAEVAELARR
HDLFFVEDNCDAVGSTYRGRLTGTFGDLSTVSFYPAHHITAGEGGCVLTASLELARIVES
MRDWGRDCWCEPGTDNTCLKRFDYQLGTLPAGYDHKYIFSHVGYNLKATDLQGALALSQL
RRVDDFGAARRRNWQRLHDGLAGVPGLLPPRATPGSDPSWFGFALTVLPGAGFTRRELVD
FLEGRRIGTRRLFGGNITRHPAYEDVRYRVVDELANCDIVTEDTFWIGVYPGLTTEMLDY
VVESITEFCTRRG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacaccaaggcgctggtgctggagctggcgcgcaagtaccacaaggaacgggag
acgcgcgcgttcgaaccgggcgtcacgccgatcctttcctcgggcgcggtcctcgacgag
gaggaccggcacgccctggtcgaggcggcgctggagatgcggatcgccgccggcgtgcgc
acccggaagttcgagagcgagttcgcccgctacttccggctgcgcaaggcgcacatggtg
aactcgggttcgtccgccaacctgctggcggtcagcgcactgacctcgccgaagctcaag
gacctgcggctgcgccccggcgacgaggccatcacggtgggcgccggcttcccgaccacg
atcaacccgctcgtccagaacggtctgacgccggtcttcgtggacgtggaactgggcacc
tacaacgcctccctggcgcagatcgaggcggcgatctccccgcgcaccaggctgatcatg
atcgcgcacgccctcggcaacccgttccccgtcgccgaggtcgccgaactggcccgccgg
cacgacctgttcttcgtcgaggacaactgcgacgcggtcggctccacctaccggggcaga
ctcaccggcaccttcggcgacctgtcgacggtgagcttctaccccgcccaccacatcacc
gcgggcgagggcggctgcgtcctcacggccagtctggaactggcccgcatcgtcgagtcg
atgcgggactggggccgggactgctggtgcgaaccgggcaccgacaacacctgtctgaag
cggttcgactaccagctcggcaccctgcccgccggctacgaccacaagtacatcttctcc
cacgtcggctacaacctgaaggccaccgacctgcagggcgccctggcgctcagccagttg
cgcagggtcgacgacttcggcgcggcccggcggcgcaactggcagcggctgcacgacggc
ctcgccggtgtgccgggactgctgccgccgcgggccaccccgggcagcgaccccagctgg
ttcggcttcgccctgaccgtgctgcccggggcgggcttcacccgcagggagctcgtcgac
ttcctggagggccgcaggatcggcacccgccggctcttcggcgggaacatcacccgccac
cccgcgtacgaggacgtgcgctaccgggtcgtggacgagctggccaactgcgacatcgtc
acggaggacaccttctggatcggtgtctatccgggactcaccaccgagatgctcgactac
gtcgtcgagtccatcaccgagttctgtacgcgaaggggctga
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