Streptomyces tirandamycinicus: DDW44_28635
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Entry
DDW44_28635 CDS
T06843
Name
(GenBank) bacteriocin biosynthesis protein SagD
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
stir
Streptomyces tirandamycinicus
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stir03009
]
DDW44_28635
Ribosome biogenesis [BR:
stir03009
]
Prokaryotic type
ribosomal protein modification factors
DDW44_28635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AWI32321
UniProt:
A0A2S1T125
LinkDB
All DBs
Position
6627755..6629956
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AA seq
733 aa
AA seq
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MPADPNTRGAAAAVSTTAARDRSCEELARLLGPALTRHGIRRRPDIAALGVRDAFAPASA
GEAGRYASRPAAPSDDAGPAVGPDDRGACESGLDGRRARATGPDDHGARATGPEAPRPAA
GPDDRRACATGPYDHRARAAEPAVPVRLYGHHAVVGPLAPGGGGVSRPCAHCLERRWQAV
RSVALREALELGSGTRSAGRLPYVTPFTADALAALIAGLVTGAGPRTGAFPPVHLVDLRT
LTVRHYPLVPDPECPSCAVPEEDTPEAAALALRPAPKVRPGSFRVRDIGDYGLSVEPFAN
PLCGALGPSVVHDVSSTSTSAAIGCFSMRSGDYLRETFWGGHADSFGHSVRIGVLEGLER
YAGMRPRAKRARVTDSLDGLRARGAHTVDPRVCGLYSDDFHRANPRVRPFTPDREIPWVW
GWSLRDERPVLVPEVLTYYHAPGLENRFVQESSNGCASGGCLEEAVYFGLMEVVERDAFL
LAWYGRARLPELDPRTSTRPATRHMVERLEMYGYEARFFDTRISFPIPVVTGVAVRYDGG
PGRMCFGAGAGLDPEAALAGALCEIATDAVNLQGRTERDESRLRAMAEDFHRVTALHDHP
LAYGIPEMGRHAHFLLGEPGEPRPPLAPLAERYGDGTVPPVSGDLRDDLVRCLGAVTGAG
FDVVVVDQTMPEQRRLGLRTVSVLVPGLLPIDFGWSRQRALGMPRLRTALREAGLRERDL
TPADLNPAPHPFP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgacccgaacacccgcggagccgccgcggcggtgtccacgaccgccgcccgg
gaccggtcctgcgaggaactggcccgtctgctgggccccgcgctcacccggcacggcatc
cgccgccgtcccgacatcgcggccctcggcgtacgtgacgccttcgcaccggcctcggcg
ggtgaggccggacggtacgcatcccgtccggccgccccctcggatgacgccggtccggcc
gtcggcccggacgaccgcggagcctgcgagtccggcttggacggccgccgtgcccgtgcg
accggcccggacgaccacggtgcccgtgcgaccggcccggaggcaccccgtccggccgcc
ggcccggacgaccgccgtgcctgcgcgaccggcccgtacgatcaccgcgcccgcgcggct
gaacccgccgtgcccgtgcggctctacggccaccacgccgtcgtcgggcccctcgccccc
ggagggggcggggtgtcccgcccctgcgcacactgcctggagcggcgctggcaggccgtg
cggtcggtggcgctgcgggaggcgctggaactgggctccggcacccggtccgcgggccgc
ctcccgtacgtcaccccgttcaccgcggacgcgctcgccgccctgatcgccggtctcgtc
accggcgccggcccccgcaccggggcgttcccgcccgtgcacctggtggacctgagaacc
ctgacggtacgtcactacccgttggtgcccgacccggagtgcccgagctgcgccgtcccc
gaggaggacaccccggaggccgccgcgctcgccctccggcccgctcccaaggtccggccg
ggcagtttccgggtccgcgacatcggtgactacggcctgtccgtcgagccgttcgccaac
ccgctgtgcggcgcactggggccgtccgtcgtccacgacgtgtcgtcgacgtccacctcg
gccgccatcggctgcttctccatgcggtccggcgactacctccgcgagaccttctggggc
ggtcacgccgacagcttcgggcacagcgtccgcatcggcgtactggaagggctggagcgc
tacgcggggatgcgcccgcgtgccaaacgcgcccgggtgacggactcgctcgacgggctg
cgggcccgtggcgcccacaccgtcgacccgcgcgtgtgcgggctctactccgacgacttc
caccgcgccaacccgagggtcaggccgttcacccccgaccgcgagatcccctgggtgtgg
ggctggtcgctgcgcgacgagcgccccgtgctggtacccgaggtgctgacgtactaccac
gcccccggcctggagaaccgcttcgtgcaggagagctccaacggctgtgcttccggcggc
tgcctggaggaggccgtctacttcgggctgatggaggtcgtcgagcgggacgcgttcctc
ctcgcctggtacggacgggcccgcctccccgaactcgacccccgcaccagcacccgcccc
gccacccgccacatggtggaacggctggagatgtacggctacgaggcccggttcttcgac
acccgcatctccttccccatccccgtcgtgaccggtgtcgccgtacggtacgacggcggt
ccgggccggatgtgcttcggcgcgggcgccgggctcgaccccgaggccgcgctcgccgga
gcgctgtgcgagatcgccaccgacgccgtcaacctccagggccgcaccgagcgcgacgag
tcccggctgcgtgccatggccgaggacttccaccgggtcaccgccctgcacgaccacccg
ctcgcctacggcatcccggagatgggccgccacgcccacttcctgctcggcgagcccggc
gaaccgcgaccgcccctcgccccgctggccgagcggtacggcgacggcacggtgcccccc
gtctccggcgacctgcgcgacgacctcgtccgctgcctcggcgccgtcaccggcgccggc
ttcgacgtggtcgtcgtcgaccagacgatgcccgagcagcgccggctcgggctgcgcacg
gtcagcgtgctcgtacccggcctgctgcccatcgacttcggctggagccggcagcgcgcc
ctcggcatgcccaggctgcgcaccgccctgcgggaggccggtctgcgcgagcgcgacctc
acccccgccgacctcaaccccgcgccgcaccccttcccctga
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