Streptomyces tirandamycinicus: DDW44_30955
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Entry
DDW44_30955 CDS
T06843
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
stir
Streptomyces tirandamycinicus
Pathway
stir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DDW44_30955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stir03400
]
DDW44_30955
DNA repair and recombination proteins [BR:
stir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DDW44_30955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Desulfoferrod_N
Motif
Other DBs
NCBI-ProteinID:
AWI32735
UniProt:
A0A2S1T248
LinkDB
All DBs
Position
7149232..7150029
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AA seq
265 aa
AA seq
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MPAPLASTAVTFGLVSIPVQIVAATEDHSVRFRQIHRSDGGQVRIQKRCEVCGQVLRLDE
IGRGWEMPDGSVLPITDEDLDSIPLSSVHAIEIVAFVPAASIDPVRVGSAYFLVAREAIS
AKPYTLIRRALERNRKVAIARYVLRDRERLGMLRVRDDVLVLQRLLWPDEVRDPAAVAPR
AQVAILEDEMAAAIELIDALTTDDLSGYRDRYRDALESLIDAKAEGGRLAPPERLPERAV
DLMAALQASVREARERRGEVSGEPE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccccactggccagcaccgctgtgaccttcgggcttgtgagcatcccggtgcag
atcgtggctgccactgaagatcactcagttcggttccggcagattcaccgcagcgatggt
gggcaggtccgaatccagaagaggtgcgaggtctgcgggcaggtgctgcggctggacgag
atcggccgcggctgggagatgccggacggctcggtgctgccgatcaccgacgaggacttg
gactccatcccgctgtcgagcgtccacgccatcgagatcgtcgcgttcgtccccgcggcc
tcgatcgacccggtgagagtcggatcggcgtacttcctcgtggctcgcgaggccatctca
gccaagccgtacacgttgatcaggcgggcgctggagaggaaccggaaggtagccatcgcg
cggtacgtgctgcgcgaccgtgagcgtctcgggatgctccgcgtccgcgatgacgtgttg
gtgcttcagcggctgctgtggcccgacgaggttcgcgatcccgctgctgttgcgccgcgg
gcgcaggttgcgatcctcgaggacgagatggccgcggccatcgagctcatcgacgcgctc
accaccgacgacctctcgggctaccgcgaccgctaccgcgatgctctggagtcactcatc
gacgccaaggccgaaggcggccggctggccccgcccgagcgcctcccggagcgggcagtg
gacttgatggcagcgctgcaggcgtccgtgcgagaggccagggagcggcgcggcgaagtg
tcaggtgagccggagtga
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