Streptococcus salivarius JIM8777: SALIVA_1102
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Entry
SALIVA_1102 CDS
T02089
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stj
Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stj03016
]
SALIVA_1102 (truB)
Enzymes [BR:
stj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SALIVA_1102 (truB)
Transfer RNA biogenesis [BR:
stj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SALIVA_1102 (truB)
Prokaryotic type
SALIVA_1102 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF4537
Motif
Other DBs
NCBI-ProteinID:
CCB95416
LinkDB
All DBs
Position
complement(1124270..1125112)
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AA seq
280 aa
AA seq
DB search
MTSHDAVFKLRKILQEKKIGHGGTLDPDVTGVLPIAVGKATRVIEYMTEAGKVYEGEITI
GFSTTTEDAGGEIVQTTPVTELDEETVDKAMASFEGEITQIPPMYSAVKVNGKKLYEYAR
AGEEVERPQRQVTITEFVRTSPIELENDTARFSFRVACSKGTYVRTLSVDLGAKLGYASH
MSALRRTASAGLTLDEALTLSQISEMVEAGDSSFLLPIEFGVQDLPAVQVTEDDAKEISF
GRFITIDSQEPLVAAFLGDKVLAIMEKRNQVYKPRKVLSQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcatgatgctgtatttaaactacgcaaaatattacaagagaaaaaaattgga
catggtggtacccttgatccagatgttactggtgtcctacctatagcagttggaaaagcg
actcgtgtcattgaatacatgactgaagcagggaaggtctatgagggagaaattaccatt
ggcttttcgacaactaccgaggatgctggtggagaaatcgtccaaactaccccagtaact
gagctagatgaagaaactgttgacaaagcaatggctagttttgagggagaaatcacacaa
attccccctatgtactcagcagttaaggtcaacggaaagaaactttatgagtacgcacgc
gctggagaagaagtagaacgtccacaacgtcaagtgaccattaccgaatttgtccgtacc
tcacccatcgagctagaaaacgacactgcgagattcagcttccgtgttgcttgtagcaag
gggacttatgtccgtactttatctgtcgatttgggtgctaaactcggatacgcgagtcat
atgtccgctcttcgtcgaacagcctcagctggtctaaccttagatgaggcactaacactc
tcacaaatttcagaaatggtagaagcgggggatagttccttcctccttcccatcgaattt
ggtgttcaggacctaccagctgttcaagtcactgaggatgatgctaaagaaatttcattt
ggtcgctttattactatcgatagccaagaacccttagttgcggcctttttaggagacaag
gttctagccatcatggaaaagcgaaatcaagtttataaacctagaaaagtattaagtcaa
tga
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