Streptococcus salivarius JIM8777: SALIVA_1109
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Entry
SALIVA_1109 CDS
T02089
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stj
Streptococcus salivarius JIM8777
Pathway
stj03420
Nucleotide excision repair
stj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SALIVA_1109 (pcrA)
03430 Mismatch repair
SALIVA_1109 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stj03400
]
SALIVA_1109 (pcrA)
Enzymes [BR:
stj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SALIVA_1109 (pcrA)
DNA repair and recombination proteins [BR:
stj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SALIVA_1109 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SALIVA_1109 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Terminase_6N
ResIII
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
CCB95423
LinkDB
All DBs
Position
complement(1130472..1132781)
Genome browser
AA seq
769 aa
AA seq
DB search
MNPLLTGMNDKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMINPWNILAITF
TNKAAREMRERAMALNPATSETLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKNLNLDPKKWNERAILGTISNAKNDLLDEVAYEHQAGDMYTQIVSKCYKAYQEELR
RSEAMDFDDLIMMTLRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANEVIKNNRN
RRPKKLWTQNDDGEQIVYYRANDERDEAVFVASTIDNIIREEGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNLIANPADNISFERVVNEPKRGVGPG
TLEKIRTFAYEQNMSLLDASANIMLSPIKGKAAQGVYDFANMILNLRDQLDGLSITEAVE
AVLDKSGYLDALSMQQTLESQARIENIEEFMSVTKNFDETNTDGTEDETGIDRLGRFLND
LALIADTDDGDMEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPEELEEERR
LAYVGITRAEEILFLTNANTRTLFGKTSYNRPSRFLREISDDLLQYQGLARPANSSFGVR
FTKEEPTQFGQGMSLQQALQTRKANAQPQRHTGAQPFSKATGGLPFGKTSDSGNSATDWE
IGDIAHHKKWGDGTVLEVTGSGKTQELKIKFPEVGLKKVLASVAPIEKK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaacccattattaactggtatgaatgacaaacaggccgaagccgtccaaacaactgaa
ggtcctttattgattatggctggtgcaggatctggtaagacacgtgtgcttacccaccgt
attgcctacctcattgacgagaaaatgattaatccctggaatatcctagccattaccttt
accaataaggcagctcgtgagatgcgtgaacgtgctatggctttaaatccagcaacttca
gaaaccttaattgcaaccttccatagtatgtgtgtgcgaatccttcgtcgtgaagccgac
catattggctacaaccgaaactttactatcgtagatcctggtgagcaacgtactttgatg
aaacgtattctcaagaatctgaacctagatcctaagaagtggaatgaacgtgccatctta
gggacaatttccaacgccaaaaacgacctcttggatgaagtggcctatgagcaccaggcc
ggtgatatgtacacccaaatcgtttctaaatgttacaaggcctatcaggaagagctccgt
cgtagtgaggccatggatttcgacgatttaattatgatgactttgcgtctctttgacaaa
aatcctgatgttctcgcctattatcagcaacgttatcagtacattcacgtggatgagtac
caagataccaaccatgctcagtatcagttggtaaaactcttggcttctcgcttcaagaat
atctgtgtcgtaggtgatgcggaccaatcaatctacggttggcgtggggctgatatgcag
aatatccttgactttgagaaggactatcctgaagccaaggtagttctcttggaagaaaac
taccgttcaaccaagaaaattctccaagcagccaatgaagttatcaagaacaaccgcaac
cgccgtcctaagaaactttggactcaaaatgacgacggtgaacaaatcgtttattaccgt
gctaatgacgaacgtgatgaagctgtttttgttgcttcaactattgataacatcattcgt
gaagaaggtaagaacttcaaggatttcgctgtactttaccgtaccaatgctcagtctcgt
accattgaagaagccttgcttaagtctaatattccttataccatggttggagggaccaag
ttctatagccgtaaagaaattcgtgatgttatttcttacttgaacttgattgcaaatcct
gcggataatattagttttgaacgtgtggttaatgaacctaaacgtggagttggacctggt
acgcttgaaaagattcgtacctttgcctatgagcaaaacatgagtctcctagatgcttca
gctaatattatgttgtcaccaatcaaggggaaagcggctcagggcgtttacgatttcgct
aacatgattctgaacctacgtgaccagctagatgggctaagcattactgaagctgtagag
gctgttttggataagtctggttatctggatgctctttctatgcaacaaacacttgaaagt
caagcacgcattgaaaatatcgaagagttcatgtctgttactaagaattttgatgaaacc
aacaccgatggtacggaagacgagactggtattgaccgtttaggccgtttcttgaacgat
ctagcgttgattgctgatacggacgatggtgatatggaagcagcagaagtaaccttgatg
accctccatgctgccaaaggacttgaattcccagttgtctttcttatcggtatggaagag
ggagtcttccccttatctcgtgcttcagaagacccagaagaactcgaagaagagcgtcgc
ttagcttacgtaggtattacccgggctgaagagattcttttccttaccaacgctaataca
cgtacgctttttggtaagactagctataatcgccctagccgtttcttgcgtgaaatttca
gatgatttattacaatatcaaggtctggcacgtccagccaattcatcatttggtgttcgt
tttacaaaggaagagccaacacaatttggtcaaggcatgagtttacaacaagcactgcag
actagaaaagcaaatgcacaacctcaaagacatacgggcgctcagccattttcaaaagct
actggcggattaccttttggcaagacttcagactctggcaattcagctactgactgggaa
atcggagatattgctcaccacaagaagtggggagatgggactgtcctagaagtaactgga
agtggcaaaacacaagaacttaagataaaattcccagaagttggacttaaaaaggttttg
gcaagcgtagcacctattgagaagaaatag
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