Streptococcus salivarius JIM8777: SALIVA_1182
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Entry
SALIVA_1182 CDS
T02089
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stj
Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stj03032
]
SALIVA_1182 (topA)
03400 DNA repair and recombination proteins [BR:
stj03400
]
SALIVA_1182 (topA)
Enzymes [BR:
stj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SALIVA_1182 (topA)
DNA replication proteins [BR:
stj03032
]
Prokaryotic type
DNA Topoisomerases
SALIVA_1182 (topA)
DNA repair and recombination proteins [BR:
stj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SALIVA_1182 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
CCB95495
LinkDB
All DBs
Position
complement(1205374..1207518)
Genome browser
AA seq
714 aa
AA seq
DB search
MATATTTKTKTKTTKKTTAKKATKKRATPKKNLVIVESPAKAKTIEKYLGRNYKVVASVG
HIRDLKKSSMSIDFENNYEPQYINIRGKGPLINELKKEAKKAKQVFLASDPDREGEAISW
HLSHILGLEPDDKNRVVFNEITKDAVKNAFVEPRAIDMDLVDAQQARRVLDRIVGYSISP
LLWKKVKKGLSAGRVQSVALKLIIDRENEIKAFKPEEYWTIDGAFKKGAKKFQASFYGLD
GKKLKLNNNDDVQAVLSRITSDDFNVDKVEKKERRRNAPLPYTTSSLQQDAANKINFRTR
KTMMVAQQLYEGINLGSGAQGLITYMRTDSTRISPVAQNQAAEFITERFGSKYSKHGSKV
KNSSGAQDAHEAIRPSNVFQTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVT
LSQNGVIFTANGSQIKFDGYMAVYNDSDKNKMLPDMAEGDTVKKVVTTPEQHFTQPPARY
SEATLIKTLEENGVGRPSTYAPTLDVIQRRYYVKLVAKRFEPTELGEIVNSLIVEFFPDI
VDVKFTAEMEGKLDKVEIGKEQWQKVIDEFFKPFQKELEKAEEGIEKIQIKDEPAGFDCD
LCGHPMVIKLGRYGKFYACSNFPDCHNTKAITKEIGVTCPTCSKGQVIERKTKRNRVFYG
CDRYPDCEFTSWDIPVGRNCPKSGDYLVEKKVRGGGKQVICSNEECDYKESIVK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcaacgacaacaaaaacgaaaactaaaacaacaaagaaaacgactgctaaa
aaggcgactaaaaagagagcgacaccaaagaaaaatttggtcatcgtggagtctcctgct
aaagcgaaaacgattgagaagtatcttggccgcaactataaagttgtagcctctgttggg
catatccgtgatttgaaaaaatcaagtatgtctattgattttgaaaacaactacgaacct
cagtacattaatattcgtggtaagggacctcttatcaatgaattgaagaaagaagctaaa
aaagccaagcaagtctttctcgcaagtgacccggaccgtgaaggggaagccatttcatgg
catttgtcacatattcttggattagagccagatgataagaatcgtgtcgtttttaacgaa
atcactaaagatgcagtaaaaaatgcctttgtagagccacgcgccattgacatggacttg
gtagatgctcagcaagctcgtcgtgtcttggaccgtattgtgggttactctatttcaccg
cttctatggaagaaggttaagaaaggtctttctgcaggtcgtgtacaatcagtagcgctt
aagcttattattgaccgtgaaaatgaaattaaggcctttaaaccagaagaatactggact
attgatggtgcctttaagaagggtgctaagaagtttcaggctagcttctatggcttagat
ggtaaaaagcttaagctcaacaataatgatgatgttcaagctgttctctctcgtatcaca
agtgatgactttaacgtagataaagtagagaaaaaagaacgtcgtcgtaatgcgccattg
ccatatacaacctcatctcttcaacaggatgctgccaataagattaatttccgtacacgt
aagaccatgatggttgcccaacagttgtatgaagggattaatctgggttcaggagctcaa
ggtttgattacctatatgcgtacggactcaacacgtatcagtccggttgctcaaaatcag
gctgctgaatttatcacagaacgctttggttctaagtattcaaaacacggcagcaaggtg
aaaaatagttcaggagcacaagatgcccatgaggctattcgtccgtcaaatgttttccaa
acaccagaaagcatcgctaagtatttggataaggatcagctcaagctttatactcttatc
tggaatcgttttgtagcgagtcaaatgacagctgcagtatttgatacgatgaaggtgacc
ttgtctcaaaacggagtcattttcactgcaaatggtagccaaatcaagttcgatggttat
atggccgtttacaacgactctgataagaataaaatgcttcctgatatggcagaaggtgat
acggttaagaaggttgtgacaacgcctgaacaacacttcacgcaaccaccagcccgctat
tctgaagcgactctgattaagacgctggaagaaaatggtgttggtcgtccgtcaacttat
gcaccgacacttgatgttattcaacgtcgttactatgtcaaattggtggctaaacgtttt
gaaccaacagaacttggtgaaatcgttaatagcttaatcgtcgaattcttcccagacatc
gtggatgttaaattcactgccgagatggaaggaaaactcgataaagttgaaatcggtaag
gaacaatggcagaaggttattgatgaattcttcaaaccattccaaaaagaattggaaaaa
gctgaagaaggtattgaaaaaatccaaatcaaggatgagccagctggttttgattgcgat
ctctgtggtcacccaatggtcatcaaacttggtcgatacggtaagttctatgcatgtagt
aacttcccagattgtcacaatactaaggccattaccaaagaaattggcgtaacttgtcca
acttgtagtaaaggtcaggtcatcgaacgtaagacaaaacgaaatcgtgtcttctatggt
tgtgatcgctatcctgactgtgaatttacgtcatgggatatccctgttggacgtaactgt
cctaaatcaggcgattatctcgttgagaagaaagtccgtggtggcggcaagcaagttatc
tgtagtaacgaagagtgtgactacaaagaatctattgttaaataa
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