Streptococcus salivarius JIM8777: SALIVA_1470
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Entry
SALIVA_1470 CDS
T02089
Symbol
sbcC
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stj
Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stj03400
]
SALIVA_1470 (sbcC)
DNA repair and recombination proteins [BR:
stj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SALIVA_1470 (sbcC)
Archaeal homologous recombinant proteins
SALIVA_1470 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
R1_ABCA1
GGDEF_2
SMC_N
Motif
Other DBs
NCBI-ProteinID:
CCB95780
LinkDB
All DBs
Position
complement(1575432..1578611)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGPEDDLTKVTFYFQQGKHLYRIERVLQQERAKRGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMDKRQAQLDGYFASQVWSEEELAVLAQTPASEKLARL
EEFLSRRQESLTGQKSILKDAHEDLAKLQKSLQIAQDVAKIFQELEQAKERYRLEIEEGA
QGQAEAKSHLEELQFAQGLQETISSLKQYQKQLLQLEQDFEIAQEKLKAKEQAFEEVKAQ
KETLATQSEGFLQKEGKLGAWKEAIIYAQSLVQEQEKIKQSSANYKRLEETYQQASKEIE
LLSQSLSDLEANRLSLESLHEAEKLLQSVSYSVDKQLAQDLKEIEGLNQELAKTEKRHQT
LSLDIDQVQEILKKLEEQLRTTLASRRQLMIAQLQAELEDGQPCMVCGSLEHPKVDGTQA
DEAALKDLMDQVEELQAQKEKQVATLSNRQATLSEVETKRQDMLDQVAKVKLTLEKHYQE
LEEQVKGQFDFDFSEDYGADRGQALLSAVEKHYQELQKRYEKEEADRVHYQNELGRAQEK
ATDLAKSYQEAKAALDQAKERLKDLQVAHPELESVEVYQERISLAKQELDLYNKQIKENS
EAYNQLHADIQGIKGQLESLTKSKEKTSQETKHLLAELNQSLKAEGALTNDLEQIQLWLL
EVNKQAIPKLQAQLTSYQTLKQELQTQISKGKELLQNHEKPDLAALTQEVQTSQESYDKQ
LAQVSVMEKGLKDATATYQAAKTLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAITVLEQIGE
NRMVGVISHVDDMKEGIAQQLAIIKSHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagttcagttagaattgaccaattttggaccttatcgtaaggaagtcatcaat
ttcacccagtttgaccacgctcccctctttttgattggtggggacacgggggctggtaag
agtaccctctttgatgccatgacggttgccttgtttgccacaaccagtggcgaccgcaat
gttgaggagatgcggtcaaccttcgctggtccagaggacgatctgaccaaggtgactttc
tacttccaacagggcaagcatctttatcgcattgagcgagtgctccagcaggagagagcc
aagcgaggtgggggtacgactatgcaaaaggcgacggcttccctagtcattgtggataag
attggtggtcaggaaattgaaaagcttggggataagatcaaggaagtgagtgaccagatt
gagcagattttgggactcaatgccgagcagttcaagcagattattctccttccgcaaaat
gattttagccgtttcttgaaagaagattccaagactaagactcaaattttgaagaaaatc
tttggaacgggtatctttgatcgttttcaaaagagcttggaagagcgtcttcgtcagagc
aataaagatatggataagcgtcaggctcagctagatggctattttgccagtcaggtttgg
tctgaggaagaattagccgtcttggcgcaaacgccagcctctgaaaaattggcacgtctt
gaagagtttttgtctcggcgtcaagaaagtcttacggggcaaaaaagcatcttgaaggat
gcccatgaggatttggcaaaactgcagaagagcttgcaaattgctcaagatgtggccaaa
attttccaagaattggagcaagccaaggagcgttaccgtctagaaattgaggaaggggct
cagggacaagcagaggcgaaatcgcatctggaggaattgcagttcgcccaagggttgcag
gaaaccatcagcagcttgaagcagtatcagaagcagttgttgcaattagaacaggacttt
gagattgctcaggagaaattaaaggctaaggagcaggcttttgaggaagtcaaggctcaa
aaagagacgcttgcaactcaatctgagggttttcttcaaaaagaagggaaactgggtgcg
tggaaagaggctattatctatgcccagagtcttgtccaagagcaggagaaaatcaaacag
tcgagtgctaactacaagaggttagaagaaacctatcagcaggcttcgaaagagattgag
ctcctttcccagtccttgtcagatttggaggctaatcgtcttagtttagagagtttacat
gaggctgaaaaactcctccagtctgtgagctacagtgtggataagcaactggctcaggat
cttaaagaaatagagggcttgaatcaggagttggcaaagaccgaaaagcgtcatcaaacc
ttatctttagatattgaccaagttcaagaaatcctcaaaaaattggaagagcagttaaga
acgaccttagcgtctcgtcgtcaactcatgattgcccagttgcaggcagaattagaggat
ggacagccctgtatggtctgtggttccttggaacatcctaaggtcgatgggacacaggct
gatgaagcggccttgaaggatctcatggaccaggtggaggaacttcaagctcaaaaagaa
aagcaagtcgctaccttgtcaaatcgccaggctaccttgagtgaagttgagactaagcgc
caagatatgcttgaccaagtggctaaagttaagttaactcttgaaaaacactatcaagaa
ctcgaagagcaagttaagggacagtttgattttgatttttcagaggactatggagctgac
cgtggacaagccttgttgagtgctgttgagaagcattatcaagaactccaaaaacgctat
gagaaggaagaggcagaccgtgtccattatcaaaatgagttaggacgagctcaggaaaaa
gcgacagatttggctaagagctatcaagaggccaaggcagctctcgaccaagctaaggag
cgcttaaaagatttgcaggtagctcatccagaactggagtctgtagaggtttatcaagaa
cggatttcccttgcgaagcaggagttggacctctacaataagcagattaaggaaaatagt
gaagcctacaaccaacttcatgccgacattcaaggcatcaaggggcaacttgagagcttg
accaagtctaaagaaaagaccagccaagaaacgaagcatctattggctgaattaaatcaa
agtcttaaggctgaaggggcgctcaccaatgacctagaacaaatccagctttggctgctt
gaagtgaacaagcaagctattcctaagcttcaggctcaattgacaagttaccaaaccctt
aaacaagaattgcagacccagattagtaagggcaaagagcttctccaaaatcatgaaaaa
ccagatttggccgctttaacacaagaggttcaaaccagtcaggaaagctatgataagcaa
ctggctcaggtgtctgtcatggagaagggacttaaggatgcgacggctacctaccaagcc
gccaaaacccttcaagacagtaatcaagaggcttttaaagctcaccaagaactcagtgat
ttggttaaggtagtcaagggagaaaatactgctctgactggacgtctcaatcttgaggtc
tatgttatccgtcagtatttccaacaaatcttggactatgccaatgccaactacatcgga
ttattaacggataaccgctattcctttgtcttgagcgaggaaggtcgaagggcgcgtgat
cactttggcttggatatcaacgtctatgatcagttgacaggtagtgaacgctccgttaaa
tcattgtctggtggtgaaacctttatcgctgcactggccattgccctatccctctcagaa
gttgtgcaaaataccagcaagggtgccgttgttgaagccctcttcatcgacgaaggtttc
ggttcgctagataaggaagccctcaccaaggctatcacggtcctagaacaaattggtgaa
aaccgaatggtcggagtcatcagccacgtggacgacatgaaagaaggcatcgctcaacaa
ctagccatcatcaagtcacacgatggtagtagccgtattaagattgtggataaggggtag
DBGET
integrated database retrieval system
