Streptococcus salivarius JIM8777: SALIVA_1471
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Entry
SALIVA_1471 CDS
T02089
Symbol
sbcD
Name
(GenBank) exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
stj
Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stj03400
]
SALIVA_1471 (sbcD)
DNA repair and recombination proteins [BR:
stj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SALIVA_1471 (sbcD)
Archaeal homologous recombinant proteins
SALIVA_1471 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
CEP104-like_TOG
Motif
Other DBs
NCBI-ProteinID:
CCB95781
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Position
complement(1578608..1579816)
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AA seq
402 aa
AA seq
DB search
MKFLHTSDWHVGRTLNGWSLLEEQAWAFQQIVDLAISEKVDGVIIAGDLYDRAVPPVDAI
KLFNKTLARLVLEEQIPVYAISGNHDGAERLHFGRDFFQPQGLHLSTRLEEAFEPIELED
CQIFLLPFIDPIDARIYYKDDEDKEIQGICDALGYIIEDMEKAFDPEKAHILVTHFAVSK
KDDSDGQSLRELMLSETSNTVGGLTNVTSDLFKAFDYVALGHIHTRFASPTKRVQYSGSP
IAFNVKEAKRKEEKGVYILELDASGDLSQTFHPLEVRRPIVVLQAPFETLMSPEFYKEQP
CQKAWFAFDIQLSSRKELEGINVRARLEEIYGTDIVEITFSRLGDVREESLTVDQHLKDL
EMQSPQEIVSDFYQTVTGGDVLSERQTALVESIFEEIGRSGQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttacatacgtcagattggcatgtggggcgaaccctcaatggctggtctttg
ttggaggagcaggcgtgggcctttcaacagattgtggatttggctattagcgaaaaagtg
gatggggttatcattgcgggagacctctatgaccgtgcggtgccccctgtggatgcgatt
aagctttttaataagaccttggcccgcttagtactggaggaacagattcctgtctatgct
atcagtggtaatcatgatggagctgaacgtttgcattttgggcgtgacttctttcaacct
cagggccttcatttaagcacacgtttggaggaggcttttgagcctattgagttggaggat
tgccagattttcctgctgccttttatcgatcctattgatgctcgtatttactataaggac
gatgaggataaggaaattcaggggatttgtgatgccttgggctacattattgaagatatg
gaaaaagcttttgatcctgaaaaagcccatattttggtgacgcattttgcggtttctaag
aaggatgatagcgatggtcaaagtctacgggaattgatgttgtctgaaactagcaatacg
gtaggtggccttaccaatgtgaccagtgaccttttcaaggctttcgattatgtggcctta
gggcatatccatacgcgttttgccagtccgaccaagcgcgtgcaatattcaggcagtcca
atcgcctttaatgtcaaggaagccaagcgtaaggaagaaaagggtgtctatattcttgaa
ttggatgcgtctggtgatttgtctcagaccttccatcctctagaggtcagacggccgatt
gtggttttacaggcgccttttgaaaccttgatgtcacctgaattttataaggagcaacct
tgtcaaaaggcctggtttgcctttgatattcaattgtccagccgtaaggaattagagggc
atcaatgtgcgtgcccgtctggaagagatttatgggacagacattgtagaaatcactttc
agtcgtttgggtgatgtcagggaagaaagcttgactgttgatcagcacttaaaagatttg
gaaatgcagtctccacaggaaattgtctctgatttttaccagacagtgactgggggcgat
gtcttgtctgagaggcaaactgcccttgtggaaagtatttttgaggagattggaaggagt
ggacaatga
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