Streptococcus salivarius JIM8777: SALIVA_1773
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Entry
SALIVA_1773 CDS
T02089
Symbol
addB
Name
(GenBank) ATP-dependent nuclease subunit B (ATP-dependent helicase addB)
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
stj
Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stj03400
]
SALIVA_1773 (addB)
Enzymes [BR:
stj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SALIVA_1773 (addB)
DNA repair and recombination proteins [BR:
stj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SALIVA_1773 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
CCB96077
LinkDB
All DBs
Position
complement(1915160..1918480)
Genome browser
AA seq
1106 aa
AA seq
DB search
MKLLYTDMSQDLTEILTEQATSYAQKGKRVFYIAPNALSFEKERKVLEYLPQSASFEITV
TRFTQMARYFILNTSNPKTQLDDTGLAMIFYKVLSHMGDDELKVYGRLRKDSNFINQLVD
LYKELQQANMTVLDLQHLDQVEKQEDLLRIFSAAQDLLLAGDFDNQSKLSAFFKEITSGH
LDKALDNTVLVIDGFTRFSAEEEALVALLNDKCHQIVIGTYASQKAYKANFVYGNVYQAS
VDFLRTLAQTYKVTPDYVTTDKEGNPSFARISRLLESRHDFSTVDEQLTAQDKQALQVWE
VVNQKEEVAQVAKSIRQLLADGKRYKDILVLLGDEESYKLQVGQIFRKFDIPYYFGKEET
MSSHPLVQFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQEDLDLFEYYVNFADIKGRHK
FLSDFTANSRDKYDLDQLNALRSQLVEPLDKLLNSRKQKGSSLLKKLVVFLEAVQVPSQM
ASLTAKASEAEKEQNEQVWKAFTQLLEQVETIFGEETLSVDDFLSILRSGMLACDYRTVP
ATVDVVNVKKYDLIQPHSAPYVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEDRSL
DIVTQSNSQRGHFVAMSLFNSASEQLVLSQPQILNETQDDMSVYLKELLDLGLSLVEKGR
NRFEAKGDQIGNYKDLLSTVIALNSSHLDADLDKETQTFWSVAVRYLRKRLDKDQVLIPN
VIDDVTTTKVDDQVMQLVFPGEEPLKLSASALTTFYNNQYVYFLRYVLGLEELESIHPDA
RHHGTYLHRVFERVMGDSSSENFDDKLEKAIAQTNQEQPFELLYTEDQESRLSRQILEDI
ARSTASVLRDNAAVKVEREEAKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKSGKNVF
DIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQDPQLNLAQFGLDKLAAQAHK
ELTYKGLFVASETEHLAGGNYDLQKTVTYDKKDLETLLDYNIKLFTSAAEVIRSGNFAVN
PYTEDGKSVQGDQIKSITHFEADRHMGQARKLLRLPSKGKKEAYLELMAKDEDDNEMQVA
EKIVPFLVTDQAVTADKKDQEDNHVD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactttatacggatatgtctcaggatttaacagaaattctgacggagcaggca
accagctatgcccaaaagggaaagagggtcttttatattgcccctaatgccctgtcattt
gagaaggagcgtaaggtcttggaatacctgcctcagtcagcatcctttgagattacggtg
actcgttttactcagatggcgagatatttcattctcaatacgagcaaccccaaaactcag
ctggatgatactggtctggccatgattttttataaggtgttgtcgcatatgggcgatgat
gagcttaaggtttacggccgcttgcgcaaggatagtaactttattaatcaattggtagac
ctttacaaagagttgcagcaggctaatatgacggttctggatttgcagcatctggatcag
gttgaaaagcaagaggatttgctcaggattttcagtgcggctcaggatctcttgttggca
ggagattttgataatcaatcaaaacttagtgccttcttcaaggaaattacctcaggccat
ctggataaggccctggataacacggttttggtcattgatggcttcacgcgtttttctgct
gaggaggaggccctagttgccctcttgaatgataagtgccaccagattgtcattgggact
tatgccagtcaaaaggcttataaggctaactttgtctatggcaatgtttatcaggcctca
gtcgattttttgagaactttggctcagacctataaggtgacacccgactatgtaacgaca
gacaaagagggcaatccttcttttgctcgcattagccgtcttttggagagccgtcatgat
tttagtacggtagatgagcagctaactgctcaggacaagcaagccttgcaggtatgggaa
gtggtcaaccaaaaggaagaggtggctcaggttgccaagagtattcgtcagttactagca
gatggcaagcgctataaggatatcttggtcctgcttggtgatgaggagagttataagctt
caggtggggcagattttccgaaaatttgatattccctattatttcggtaaggaagaaacc
atgtctagccatcctttggtgcagtttgtggattcgctggaacgtatcaagcgctataat
tatcgtgctgaggatttgcttaatctcgtaaaatccggtctctatggtggttttgctcaa
gaggacttagacctttttgaatattatgtcaattttgcagacatcaaggggcgtcacaag
ttcttgtctgattttacggccaatagtcgtgataagtatgatttagaccagcttaatgcc
ttgcgctcacaactggtagagcccttggacaagttgcttaatagtcgcaaacaaaagggt
tctagtctactcaagaaactagtggtctttttagaggctgtgcaagtgccaagccaaatg
gctagtttgactgccaaggccagtgaggcggaaaaagaacagaacgaacaggtctggaag
gctttcacacaactcttggagcaggttgagactatttttggggaagaaacactgtcagtg
gacgactttttgtccattttgcgttcaggaatgttggcctgtgattaccgtacggtccca
gccactgtcgatgtggtcaatgtgaagaaatacgatttgattcaaccacattctgctcct
tatgtttttgccttggggatgacccagtcacattttccaaaagtaggtcaaaataagagt
ctcctgtctgatgaggaacggagtcgtatcaatgaggcgacggatgaagacaggagtttg
gatattgttacgcagagcaatagtcagcgggggcattttgtagctatgtcactttttaat
tcggctagtgaacaattggtgcttagtcagccacaaattctcaatgagactcaagatgac
atgtcggtttatttgaaagagctgctagaccttggcctttctttggttgaaaaaggacgt
aatcgtttcgaggctaagggtgaccagattgggaactacaaggaccttctatcaactgtc
attgcccttaacagtagccatttagatgctgatttggataaggaaacgcagactttctgg
tcagttgctgtgcgttatctccgtaagcgacttgataaggaccaagtcttgattccaaat
gtgattgacgatgtgacgacaaccaaggtggatgatcaagtcatgcagcttgtctttccg
ggggaagaaccactgaaattatcagcctcggctttgacgaccttttataacaaccaatat
gtttatttcttgcgttatgttttggggcttgaagagttggagtccatccatccagatgct
cgacaccacgggacttacttgcaccgtgtctttgagcgtgttatgggggattcttcgtca
gaaaacttcgatgataaattggaaaaggctattgctcagaccaatcaggagcaacccttt
gaacttctctatacagaggaccaagagagtcgcttgtctcgtcagattttagaagatatc
gcccgttcaactgccagtgttttgcgtgacaatgcggctgttaaggttgagcgtgaggaa
gccaagtttgatttgcttttagcaaatagcatcaagattacagggattattgaccgtgtg
gatcgtttaacggatggggctctgggtgtcgttgactataagtcaggcaaaaatgtcttt
gacattcagaaattctacaatggcctcagcccacagttggtaacctatctagaagccctt
cgccaaacctataaggttgatgctgatcagctttttggtgccatgtatcttcacatgcag
gacccacagcttaacttagctcagtttggtctggacaagctagcagctcaggctcataag
gaattgacctataagggactttttgtggcttcagaaacagagcatctagctggtggaaac
tatgatttgcaaaagactgtcacctatgacaagaaggacctagaaaccttgctagactac
aatatcaagctctttacaagtgctgctgaggttattcgaagcgggaattttgcggtcaat
ccttatactgaggatggcaagtctgttcaaggggatcaaatcaagtctattactcatttt
gaggccgaccgccacatgggacaggcgcgaaaactcttgcgtttaccaagtaagggcaag
aaggaagcctatttggagctgatggcaaaagatgaggacgataatgagatgcaagttgct
gaaaaaatcgtcccctttctagtcactgatcaagctgtgacagcagacaaaaaagaccag
gaggacaaccatgttgactaa
DBGET
integrated database retrieval system
