Streptococcus salivarius JIM8777: SALIVA_1857
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Entry
SALIVA_1857 CDS
T02089
Symbol
yhaM
Name
(GenBank) 3-5 exoribonuclease yhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
stj
Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stj03019
]
SALIVA_1857 (yhaM)
Messenger RNA biogenesis [BR:
stj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SALIVA_1857 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CCB96156
LinkDB
All DBs
Position
complement(1998636..1999577)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDEYFEGFYLIKRAEVRKTRAGKDYIAFTFQDDTGEISGNLWDAQPYNVEEFT
AGKVVHMEGRREVYNNTPQVNQITLRLPTFGEPNDPADFKEKPPVNPSEVREYLEQMIFK
IEEATWQRVVRALYRKYNKEFFTFPAAKTNHHAFESGLAYHTATMVRLADSIGDIYPELN
KSLLFAGIMLHDLAKVIELTGPENTEYTVRGNLIGHIALIDEEITKVLMELNIDDTREDV
VVLRHVILSHHGQLEYGSPVRPRIMEAEIIHMIDNLDASMMMMTTALNLVGPGEMTNRLF
AMDNRSFYKPKFD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaatcaaatgaaaaaagacgagtattttgaaggtttttatctgattaagcgt
gcagaggtacgtaagacaagagcaggaaaggattacattgcctttacattccaggatgat
actggtgagatttcagggaacctatgggatgctcagccttataatgtcgaagaatttacc
gcaggtaaagtagtgcatatggagggccgtcgagaggtttataataatactcctcaggta
aaccaaattaccttacgcttgcctacatttggtgagccaaatgatccggctgatttcaaa
gagaaaccaccagtaaatccttccgaagtacgcgaatacctagagcaaatgattttcaag
attgaggaagcaacttggcagcgtgttgttcgtgccctttatcgaaagtataataaagag
ttcttcacttttccagctgctaaaacaaatcatcatgcttttgaaagtggactagcctat
catacagctactatggttcgcctagcggacagcattggagatatttatccagagctcaat
aagagcctactctttgccggaattatgcttcatgatttagctaaggtcattgaacttact
ggtcctgaaaatactgagtatacggttcgtggaaacttgattggtcatattgctttgatt
gatgaagaaatcactaaggtgctcatggagctcaatattgacgatacgcgtgaggatgtc
gttgttttgcgtcatgtcattctcagccaccacggacaactagagtatggtagtccagtg
cgcccccgtattatggaagcagaaattattcatatgattgataatcttgatgccagtatg
atgatgatgacgacagcccttaacctagtaggtccaggagaaatgacaaatcgtctcttt
gctatggataatcgttctttctacaagccaaaatttgattaa
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