Streptomyces sp. JL2001: ACE1OA_15370
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Entry
ACE1OA_15370 CDS
T11502
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
stjl Streptomyces sp. JL2001
Brite
KEGG Orthology (KO) [BR:
stjl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stjl03016
]
ACE1OA_15370 (thpR)
Enzymes [BR:
stjl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ACE1OA_15370 (thpR)
Transfer RNA biogenesis [BR:
stjl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ACE1OA_15370 (thpR)
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Paralog
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF2895
Motif
Other DBs
NCBI-ProteinID:
XVL70251
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All DBs
Position
complement(3481766..3482353)
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AA seq
195 aa
AA seq
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MRLFAAVSPPAEQQDELGRAVDRLSRLPGADDLRWTARPGWHFTLAFMGEVDEDLLPDLQ
ARLARAAHRTAPFPLRLHRGGHFGRRALWVGAAGDLDEMRLLAERADAAARRAGVPMDEH
RRYQAHLTVARARADRDLRPFAAALDTFEGTRWEVSELALVRSRLPVAGVSGERPRYETV
GSWPLGGAEHGPGPG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcgccgcggtgtcgccacccgcggagcagcaggacgagctcggccgggcc
gtggaccggctgagccggctgcccggcgccgacgacctgcgctggaccgcccggccgggc
tggcacttcacgctcgccttcatgggcgaggtcgacgaggacctgctccccgacctccaa
gcgcgtctcgcccgtgccgcccaccgcaccgcgccgttcccgctccgtctccaccggggc
ggccacttcggccgccgcgcgctgtgggtgggggcggccggcgacctggacgagatgcgg
ctgctcgccgagcgcgccgacgcggccgcccgccgggcgggcgtgccgatggacgagcac
cgccgctaccaggcccacctcaccgtcgcccgggcccgtgcggaccgggatctgaggccc
ttcgccgccgcgctcgacaccttcgagggcacccgctgggaggtctccgagctggctctc
gtgcgcagccggctgccggtcgccggggtgtcgggcgaacggccgcgctacgagacggtc
ggctcctggcccctgggcggggcggagcacggtccgggcccgggttaa
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